Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03171 ATGCTATTCTGCAAGAAAAGAAAGAACCTCATGAGTGCTTCTTCCTTCAGAAAATTTGACAAGGATGAAGCAGTGGGAGAACGCAGAATCAGCAAACCAAGGTGGCTTGAGTCTTTTCTGAGGAAAACTTTCTTTGGCAACTGCACAACTCATCTATTCCGTAGGAATGAGTTAAATAAGTATTGTATAAACTGCAATTTGTCAGTTTGCCAATATTGTGTAGCTTCAGGTCATCGCCATCACAAAATTCTCAAAATCTATAGACATGTTTACAAGGATGTTGTCTCTCTTGCAACTATGGAAAAGTATATTGACAGCTCACAGATTCAGCCTTACAAATGCAACAAGCGACTGGTTATTTCACTGAATCCTCTACCTCATTCTGGTTCAACAGCAAATAATGAGGCATCATGCAATACTTGCAAAAGAAAATTGACTGAACCTGATTTATTTCGCTATTGCTCCATTTCTTGCAAGGTTAGAGCTGTTTTAAGTAACCCAGATGAATCAGCTCCTCCTTTCATTTCCATCCAGACTCCTCGTCTTCCCCCTTCACAGGAAAAGCCAGAGGAAACTTCTGAACCTCAAAATCCACAGAAGAGTAGAAGAAAGGGAATACCCCATAGGGCTCCCTTCTTCTGA 642 0.4019 MLFCKKRKNLMSASSFRKFDKDEAVGERRISKPRWLESFLRKTFFGNCTTHLFRRNELNKYCINCNLSVCQYCVASGHRHHKILKIYRHVYKDVVSLATMEKYIDSSQIQPYKCNKRLVISLNPLPHSGSTANNEASCNTCKRKLTEPDLFRYCSISCKVRAVLSNPDESAPPFISIQTPRLPPSQEKPEETSEPQNPQKSRRKGIPHRAPFF* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03171 213 ProSiteProfiles Zinc finger B-box type profile. 48 86 IPR000315 GO:0008270
Phac8g03171 213 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 28 212 - -
Phac8g03171 213 Pfam PLATZ transcription factor 88 160 IPR006734 -
Phac8g03171 213 CDD Bbox2 48 86 - -
Phac8g03171 213 SUPERFAMILY B-box zinc-binding domain 45 87 - -
Phac8g03171 213 MobiDBLite consensus disorder prediction 171 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03171 Phac-Chr8 40191324 40198660 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phac8g03171 PLATZ 4.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03171 - - adu:107457969 263.848