Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03170 ATGCTATTCTGCAAGAAAAGAAAGAACCTCATGAGTGCTTCTTCCTTCAGAAAATTTGACAAGGATGAAGCAGTGGGAGAACGCAGAATCAGCAAACCAAGGTGGCTTGAGTCTTTTCTGAGGAAAACTTTCTTTGGCAACTGCACAACTCATCTATTCCGTAGGAATGAGTTAAATAAGTATTGTATAAACTGCAATTTGTCAGTTTGCCAATATTGTGTAGCTTCAGGTCATCGCCATCACAAAATTCTCAAAATCTATAGACATGTTTACAAGGATGTTGTCTCTCTTGCAACTATGGAAAAGTATATTGACAGCTCACAGATTCAGCCTTACAAATGCAACAAGCGACTGGTTATTTCACTGAATCCTCTACCTCATTCTGGTTCAACAGCAAATAATGAGGCATCATGCAATACTTGCAAAAGAAAATTGACTGAACCTGATTTATTTCGCTATTGCTCCATTTCTTGCAAGGTGATCATGATAATTTGGCAATCGCAACCATTAATTGTTCTTCAGTGA 525 0.379 MLFCKKRKNLMSASSFRKFDKDEAVGERRISKPRWLESFLRKTFFGNCTTHLFRRNELNKYCINCNLSVCQYCVASGHRHHKILKIYRHVYKDVVSLATMEKYIDSSQIQPYKCNKRLVISLNPLPHSGSTANNEASCNTCKRKLTEPDLFRYCSISCKVIMIIWQSQPLIVLQ* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03170 174 ProSiteProfiles Zinc finger B-box type profile. 48 86 IPR000315 GO:0008270
Phac8g03170 174 Pfam PLATZ transcription factor 88 160 IPR006734 -
Phac8g03170 174 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 28 160 - -
Phac8g03170 174 SUPERFAMILY B-box zinc-binding domain 45 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03170 Phac-Chr8 40191324 40198405 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phac8g03170 PLATZ 3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03170 - - adu:107457969 219.55