Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03168 ATGGAGTTTGGATTTTTCCGTGGCTTGCCTGAGAATCTCTTTATTCTGGACATCATTGGACAAATAGCTTTTCTCGTCGATATTTTCTTGCAATTCTTTGTTGCTTACAGAGACAGCCAGACCTATCGTATGATCTACAAGCGAACACCTATAGCTCTGCGGTATCTAAAATCTGACTTCATGTTGGATCTTCTTGGGTGTATGCCATGGGACGTCATCTTCAAGGCTAGTGGACGAAGAGAGGAAGTGAGGTACCTTTTGTGGATCAGATTATACAGGGTGCGGAAAGTCACAGATTTTTTCCACAAGTTGGAGAAGGACATACGTGTCAATTACATTACTACCCGGATTGTGAAACTGATTGTGGTCGAACTCTACTGCACCCATACAGCAGCCTGCATTTTCTACTTTTTGGCTACTACTCTACCAGACTCACAAGAAGGGTACACATGGATAGGAAGTTTAAAGTTGGGTGACTATAGTTATTCACATTTCAGAGAAATTGATCTTTGGAAGCGCTACACAACATCTCTGTATTTCGCTATTGTTACTATGGCAACAGTCGGCTATGGAGACATACATGCAGTAAATTTGAGGGAGATGATATTCGTAATGGTATACGTTTCATTTGATATGATTCTTGGTGCCTATTTGATCGGTAACATGACAGCTTTGATAGTCAAGGGGTCAAAAACTGAGAAGTTTAGAGATAAGATGGCAGACCTTCTGAAATATATGAACAGAAATAAGCTTGGAAGGGATATCCGTGAACAAATTAAAGGCCATGTGCGATTACAGTATGAGAGTAGCTACACTGAGGCTGCTGTCATTCAGGATATCCCTATTTCTATTCGAGCTAAGATATCCCAAACATTATACTTGCCATACATAGAAAATGTTTCTCTTTTTAAGGGATGCTCTTCAGAATTCATCAACCAGATTGTTATTAGGATCCATGAGGAGTTCTTTCTTCCTGGGGAAGTTATAATGGATCAAGGAAATGCTGTAGATCAACTATATTTTGTATGTCATGGAGTGCTGGAAGAAGTGGGCATAGCTGAAGATGGGTCTGAAGAAACTGTTTCACTTCTTCAGCGTCACAGTTCATTTGGAGAAATATCAATTCTTTGCAACATTCCTCAGCCATATACTGTTCGCGTTTGTGAACTGAGTAGACTCCTGCGACTTGATAAACAATCATTTACAAATATCCTAGACATATACTTTTATGATGGAAGGAAAGTATTAAACAACCTTCTAGAGGGAAAAGAGTCTTTTCGAGGTAAGCAGTTGAAGTCGGACATCACATTTCATATTGGAAAACAAGAAGCTGAGCTTGCTTTGAAGGTCAATAGTGCAGCTTTTCATGGGGATCTGCATCAGCTTAAAGGTTTAATTCGAGCTGGAGCTGATCCCAACAAGACAGATTATGATGGAAGATCACCTTTACATCTTGCAGCATCTAGAGGACACGAAGATATAACACTTTTCCTTATTAAAGAACGTGTAGATATCAATATTAAAGATAACTTCGGGAACACGCCCTTACTTGAAGCAGTTAAGAATGGAAATGATCGGGTTGCTTCTTTACTTGTTAAAGAAGGGGCCTCCATGAAGATCGAAAATGCTGGTAGTTTTTTGTGTACAGCAGTTGCAAGGGGAGATTCAGATTATCTTAAAAGACTTTTATCCAATGGCATGGATCCTAACTTAAAAGATTATGATTACCGAAGCCCTCTTCACATAGCCGCAGCCGAAGGTTTATACTTCATGGCAAAGTTGCTATTAGAAGCCGGAGCTACTGTTTTTAACAAAGACAGATGGGGGAATACCCCTCTTGATGAAGCCCGGATGTGTGGAAATAAGAATCTGATCAAGTTACTGGAAGAAGCAAAATCTGCTCAACTTTTAGAATTCCCGTATTCCTCCCAAGAATCTACAGATAAAATGCACGCAAAGAAGTGCACAGTCTTCCCTTTCCACCCGTGGGATCCGGAAGATAATAGAAGACATGGAATTGTACTATGGATTCCGCACTCCATCGAAGAGCTAATCAAATCAGCTGCAGAACAATTAAAAATTTCTGGCGATTCTTGTATTTTATCAGAAGATGGTGGTAAAATTAATGACGTGGACATGATTAAGGATGGTCAGAAGCTGTACTTAGTCAATGAAACACATTAA 2184 0.3974 MEFGFFRGLPENLFILDIIGQIAFLVDIFLQFFVAYRDSQTYRMIYKRTPIALRYLKSDFMLDLLGCMPWDVIFKASGRREEVRYLLWIRLYRVRKVTDFFHKLEKDIRVNYITTRIVKLIVVELYCTHTAACIFYFLATTLPDSQEGYTWIGSLKLGDYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFVMVYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMADLLKYMNRNKLGRDIREQIKGHVRLQYESSYTEAAVIQDIPISIRAKISQTLYLPYIENVSLFKGCSSEFINQIVIRIHEEFFLPGEVIMDQGNAVDQLYFVCHGVLEEVGIAEDGSEETVSLLQRHSSFGEISILCNIPQPYTVRVCELSRLLRLDKQSFTNILDIYFYDGRKVLNNLLEGKESFRGKQLKSDITFHIGKQEAELALKVNSAAFHGDLHQLKGLIRAGADPNKTDYDGRSPLHLAASRGHEDITLFLIKERVDINIKDNFGNTPLLEAVKNGNDRVASLLVKEGASMKIENAGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHIAAAEGLYFMAKLLLEAGATVFNKDRWGNTPLDEARMCGNKNLIKLLEEAKSAQLLEFPYSSQESTDKMHAKKCTVFPFHPWDPEDNRRHGIVLWIPHSIEELIKSAAEQLKISGDSCILSEDGGKINDVDMIKDGQKLYLVNETH* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03168 727 ProSiteProfiles Ankyrin repeat region circular profile. 478 510 - -
Phac8g03168 727 SUPERFAMILY cAMP-binding domain-like 230 419 IPR018490 -
Phac8g03168 727 Gene3D - 3 228 - -
Phac8g03168 727 ProSiteProfiles Ankyrin repeat profile. 511 543 IPR002110 GO:0005515
Phac8g03168 727 PRINTS Ankyrin repeat signature 591 605 IPR002110 GO:0005515
Phac8g03168 727 PRINTS Ankyrin repeat signature 479 494 IPR002110 GO:0005515
Phac8g03168 727 ProSiteProfiles Ankyrin repeat profile. 575 607 IPR002110 GO:0005515
Phac8g03168 727 ProSiteProfiles Ankyrin repeat profile. 542 574 IPR002110 GO:0005515
Phac8g03168 727 FunFam Gated outwardly-rectifying K+ channel 517 643 - -
Phac8g03168 727 Pfam Cyclic nucleotide-binding domain 322 406 IPR000595 -
Phac8g03168 727 CDD CAP_ED 302 416 IPR000595 -
Phac8g03168 727 Gene3D Jelly Rolls 286 423 IPR014710 -
Phac8g03168 727 Gene3D - 435 543 IPR036770 -
Phac8g03168 727 SMART cnmp_10 302 420 IPR000595 -
Phac8g03168 727 ProSiteProfiles Ankyrin repeat profile. 478 510 IPR002110 GO:0005515
Phac8g03168 727 Pfam Ion transport protein 12 227 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac8g03168 727 SUPERFAMILY Ankyrin repeat 451 630 IPR036770 -
Phac8g03168 727 Gene3D Helix hairpin bin 229 285 - -
Phac8g03168 727 Gene3D - 544 637 IPR036770 -
Phac8g03168 727 Pfam Ankyrin repeats (3 copies) 548 629 IPR002110 GO:0005515
Phac8g03168 727 Pfam Ankyrin repeats (3 copies) 453 541 IPR002110 GO:0005515
Phac8g03168 727 Pfam KHA, dimerisation domain of potassium ion channel 653 722 IPR021789 -
Phac8g03168 727 SUPERFAMILY Voltage-gated potassium channels 8 227 - -
Phac8g03168 727 PRINTS EAG/ELK/ERG potassium channel family signature 17 27 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac8g03168 727 PRINTS EAG/ELK/ERG potassium channel family signature 174 191 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac8g03168 727 PRINTS EAG/ELK/ERG potassium channel family signature 218 227 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac8g03168 727 PRINTS EAG/ELK/ERG potassium channel family signature 126 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac8g03168 727 SMART ANK_2a 542 571 IPR002110 GO:0005515
Phac8g03168 727 SMART ANK_2a 478 507 IPR002110 GO:0005515
Phac8g03168 727 SMART ANK_2a 443 474 IPR002110 GO:0005515
Phac8g03168 727 SMART ANK_2a 575 604 IPR002110 GO:0005515
Phac8g03168 727 SMART ANK_2a 511 540 IPR002110 GO:0005515
Phac8g03168 727 SMART ANK_2a 608 637 IPR002110 GO:0005515
Phac8g03168 727 FunFam Potassium channel SKOR 1 227 - -
Phac8g03168 727 PANTHER POTASSIUM CHANNEL AKT1 1 724 IPR045319 GO:0005249|GO:0006813
Phac8g03168 727 FunFam Potassium channel KAT2 290 427 - -
Phac8g03168 727 ProSiteProfiles Ankyrin repeat region circular profile. 575 607 - -
Phac8g03168 727 ProSiteProfiles cAMP/cGMP binding motif profile. 302 422 IPR000595 -
Phac8g03168 727 ProSiteProfiles Ankyrin repeat region circular profile. 511 542 - -
Phac8g03168 727 ProSiteProfiles KHA domain profile. 654 727 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03168 Phac-Chr8 40174811 40183182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03168 521 638 Ion Channels AT5G37500 31.081 5.52e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03168 K21867 - gmx:100814385 1357.81