Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03146 ATGAAGTCTGCGCGGGTCATAGAAGCGATTTTCTTTACTCTCCTAACGTGCCTCTTCGCCATTGCCGATTCGGATCTAGCTTCGGACAGAGCGGGGTTGGTGTCACTCCGAAGCGCGTTGGGGGGACGCACGCTGCTATGGAACACCACCCAAAGAACCCCTTGCTCCTGGACCGGCGTAACCTGCACCAACGGCAGAGTAACCTTGCTGCGCCTCCCTGCGATGGGTCTCTCCGGTTCGCTGCCCTCCGGTTTGGGAAACCTCACCGAATTGCAGACGCTCTCCCTTCGGTTCAACGCGCTAACCGGACGAATCCCGGCGGATTTCGTTAACCTCAAAGCGCTGCGGAACCTCTATCTCCAGGGAAACTTCTTCTCCGGGGAAGTTCCTGATGCGGTATTCGCTTTGCAGAACCTCGTGAGGTTGAATTTAGGTAGCAACAATTTCAGCGGCGAGATTTCGCCCAAGTTCAATGGTCTCACTCGTTTGTCCACTCTTTATCTCGAACGCAACAATTTCACTGGTTCAATCCCGGACCTTAGTGTTCCGCCTCTGGATCAGTTCAACGTCTCGTATAATTCCCTTAACGGTTCCATTCCGAACCGGTTTTCGCGTGTGGACCCGACCGCTTTTCTCGGAAACTCACTCTGCGGGAAGCCCTTACAACTTTGCCCCGGAACTGAGGAGAAGAGAAAGAGTAAATTATCCGGTGGTGCCATTGCGGGTATTGTGATTGGTTCCGTGTTTGGTTTGCTGTTGATTCTGCTGCTTTTGTTCTTTTTGTGTAGAAAAAGGAGTGGGAAAAACGATGAAAGTGTGTCAACTGGGAAGCGTGATGTGGAAGGTGAAGTGTCTCGGGAAAAGAGTGTTGAGAGTGGGAATTCAGGTTCCGCAGTGGCAGGTTCGGTGGAGAAGAGTGAGGTTCAAAGTAGTGGTGGTGGAGATAAGAGTTTGGTGTTTTTTGGGAATGTGAATAGAGTGTTTAGTTTGGATGAGTTGTTGAGGGCTTCTGCGGAAGTGTTGGGGAAAGGTACGTTTGGAACGACTTATAAGGCGACTTTGGAAATGGGGGTGAGTGTGGCGGTGAAGAGGTTGAAGGATGTTACTGCCACAGAGAGGGAATTCAGGGAGAAGATTGAGCAAGTGGGGAAGATGGTTCATCACAACTTGGTCCCACTAAGGGGTTATTTCTTTAGCAGGGATGAGAAACTTGTTGTCTATGATTACATGCCTATGGGAAGCTTATCTGCTCTCTTACATGCAAATGGTGGGGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCCATTGCCCTTGGTGCTGCTCGTGGGATTGCCCACATTCATTCGCATGGCCCAACATCCTCTCATGGAAACATCAAGTCATCGAATATTCTTCTCACCAAATCTTTTGAAGCTCGTGTCTCTGACTTTGGCCTTGCTTACCTTGCTCTTCCAACCTCTACTCCAAACCGTGTTTCTGGTTACAGAGCACCAGAGATCACTGATGCGCGCAAAGTATCCCAAAAAGCTGATGTCTATAGCTTTGGCATCATGCTTTTAGAGCTGCTTACAGGGAAGGCTCCTGCTCATTCTTCACTGAATGACGAAGGGGTGGACCTCCCAAGATGGGTTCAATCTGTGGTTGAAGGTGAGTGGAATACTGATGTGTTTGACATGGAGCTTCTAAGGTACCAGAGTGTTGAGGAGGAAATGGTGAAGCTCTTGCAGCTTGCCCTTGAATGCACTGCCCAATATCCTGATAAAAGACCTTCAATGGATGTGGTGGAAAGCAAGATTGAGGAAATTTGCCATCCTAGTTTAGAGAAAGAGGAAGAGAAGAATAATGATTTTAAAGATGCTGATAATGGATTGTCCCAACAATACTACTCTGTTGACTCGGGTGTGTCACAAGCTTGA 1923 0.4893 MKSARVIEAIFFTLLTCLFAIADSDLASDRAGLVSLRSALGGRTLLWNTTQRTPCSWTGVTCTNGRVTLLRLPAMGLSGSLPSGLGNLTELQTLSLRFNALTGRIPADFVNLKALRNLYLQGNFFSGEVPDAVFALQNLVRLNLGSNNFSGEISPKFNGLTRLSTLYLERNNFTGSIPDLSVPPLDQFNVSYNSLNGSIPNRFSRVDPTAFLGNSLCGKPLQLCPGTEEKRKSKLSGGAIAGIVIGSVFGLLLILLLLFFLCRKRSGKNDESVSTGKRDVEGEVSREKSVESGNSGSAVAGSVEKSEVQSSGGGDKSLVFFGNVNRVFSLDELLRASAEVLGKGTFGTTYKATLEMGVSVAVKRLKDVTATEREFREKIEQVGKMVHHNLVPLRGYFFSRDEKLVVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIALGAARGIAHIHSHGPTSSHGNIKSSNILLTKSFEARVSDFGLAYLALPTSTPNRVSGYRAPEITDARKVSQKADVYSFGIMLLELLTGKAPAHSSLNDEGVDLPRWVQSVVEGEWNTDVFDMELLRYQSVEEEMVKLLQLALECTAQYPDKRPSMDVVESKIEEICHPSLEKEEEKNNDFKDADNGLSQQYYSVDSGVSQA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03146 640 ProSiteProfiles Protein kinase domain profile. 335 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03146 640 MobiDBLite consensus disorder prediction 289 312 - -
Phac8g03146 640 Gene3D Transferase(Phosphotransferase) domain 1 410 630 - -
Phac8g03146 640 PANTHER OS05G0588300 PROTEIN 11 610 - -
Phac8g03146 640 MobiDBLite consensus disorder prediction 622 640 - -
Phac8g03146 640 SUPERFAMILY L domain-like 47 206 - -
Phac8g03146 640 SUPERFAMILY Protein kinase-like (PK-like) 339 598 IPR011009 -
Phac8g03146 640 Gene3D Ribonuclease Inhibitor 132 225 IPR032675 -
Phac8g03146 640 Pfam Protein kinase domain 338 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03146 640 Gene3D Ribonuclease Inhibitor 31 131 IPR032675 -
Phac8g03146 640 FunFam Probable inactive receptor kinase RLK902 26 181 - -
Phac8g03146 640 FunFam pollen receptor-like kinase 1 304 409 - -
Phac8g03146 640 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Phac8g03146 640 CDD STKc_IRAK 341 604 - -
Phac8g03146 640 MobiDBLite consensus disorder prediction 268 288 - -
Phac8g03146 640 Gene3D Phosphorylase Kinase; domain 1 303 409 - -
Phac8g03146 640 MobiDBLite consensus disorder prediction 608 640 - -
Phac8g03146 640 FunFam Probable inactive receptor kinase At1g48480 410 612 - -
Phac8g03146 640 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Phac8g03146 640 MobiDBLite consensus disorder prediction 268 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03146 Phac-Chr8 40021310 40024840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03146 25 604 Receptor kinase-like Gene Family AT1G48480 57.980 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac8g03146 Pkinase 2.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03146 - - gmx:100801582 1026.16