Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03138 ATGGGAAGACAGCCATGTTGTGATAAAGTTGGGTTGAAGAAGGGGCCATGGACTGCAGAGGAGGATAAGAAGCTCATCAGCTTCATCCTCACCAATGGCCAATACTGCTGGAGAGCTGTCCCTAAGCTTGCAGGACTGTTAAGGTGTGGCAAGAGTTGCAGACTGAGGTGGACAAATTACCTTAGACCAGACTTAAAGAGAGGTCTTCTTTCAGAATACGAAGAGAAAATGGTGATTGATCTTCATGCTCAACTTGGCAATAGATGGTCCAAGATTGCTTCTCATCTACCTGGAAGAACTGATAATGAGATTAAAAACCATTGGAACACCCACATAAAGAAAAAACTCAAGAAAATGGGCATTGATCCCATCACACACAAACCACTCCCTAATGCAACTGAACAAACCCAAAATCAACCCAAACAACAACAACTACACCAACCACTAGAAGAAGAGCAAAACCAACAACCTTTGCAAGTTGACTTTGACCCCAAGGTTGACCCTAGTAAGGAGCCAGAGATTTCACTGGAGTCATCAACCACCAGTACTGAAGCCAGAGAGGAAGACCAATTCATAGCAACACCCAAATTTGACACAATGGAGCTTAATCAGCTAGTGAATAATGGGTTCTGCACAGATGAAGTTCCAATAATTGAACCTAATGAGATTCTAATGCCTTGTGCTCCTTCCTCTTCATCCACCTCTTCATCTTCTTCTTCAAATTCAACCAACATCCTTCAAGACCTGCAGCTACCTGATTTTGAATGGTGTTGTGATTACAGTGATAGTAGTCTTATTATTAACAATAACAACCATGAAGACAAGAGCAGCAACAATAGCGGTATGGCCTTGTGGGATGATGATGACTTCATTTCCAAACTTAATTGGCTGATTAACGAAGATGATGATTCTGATGGAAACCAAGTGTTTGATGGTTCTCTCACTCAGTTCTCAAGAATGGTCACGGATTCAGAATCTTGGGCATTTGGCTTGTTTTGA 999 0.4194 MGRQPCCDKVGLKKGPWTAEEDKKLISFILTNGQYCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPITHKPLPNATEQTQNQPKQQQLHQPLEEEQNQQPLQVDFDPKVDPSKEPEISLESSTTSTEAREEDQFIATPKFDTMELNQLVNNGFCTDEVPIIEPNEILMPCAPSSSSTSSSSSSNSTNILQDLQLPDFEWCCDYSDSSLIINNNNHEDKSSNNSGMALWDDDDFISKLNWLINEDDDSDGNQVFDGSLTQFSRMVTDSESWAFGLF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03138 332 FunFam MYB-related transcription factor 70 130 - -
Phac8g03138 332 SMART sant 66 114 IPR001005 -
Phac8g03138 332 SMART sant 13 63 IPR001005 -
Phac8g03138 332 Gene3D - 11 67 - -
Phac8g03138 332 CDD SANT 16 61 IPR001005 -
Phac8g03138 332 Gene3D - 70 156 - -
Phac8g03138 332 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Phac8g03138 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac8g03138 332 PANTHER F14D16.11-RELATED 1 289 - -
Phac8g03138 332 MobiDBLite consensus disorder prediction 129 160 - -
Phac8g03138 332 MobiDBLite consensus disorder prediction 122 188 - -
Phac8g03138 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac8g03138 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac8g03138 332 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac8g03138 332 FunFam MYB transcription factor 11 67 - -
Phac8g03138 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac8g03138 332 CDD SANT 74 112 IPR001005 -
Phac8g03138 332 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac8g03138 332 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03138 Phac-Chr8 39966590 39969294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03138 1 332 MYB Transcription Factor Family AT5G16600 48.219 1.66e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g03138 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03138 K09422 - gmx:100792103 497.278