Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03127 ATGAAGAGGGAAGGGATGGAAGACGCCAATGCAGTGAAAGGTGAATGTTCAAGCAGTGGGAAGGGGAAGGTGGTGTTTGAGGAAGAAGAAAATGAAGACAAGTTGTTGGCAGGTGTAGGATACAAAGTGTGTTCCTCGGACATGGTTGACGTGGCACACAAGCTCGACCAATTGGAGATGGTCATGGAGGAAGATGGAATTTCCCATCTCGCCACCAACACCGTGCATTACGACCCAACCGATCTATACGGCTGGGTCCAGAACATTCTCAACAACGCGCCCAATCACATCACCACCACCACCAACAACGCTCTCATTCCATCGCCGTTAATCACCGTCCCCGAGAACGATCTAAGAGCGATTCCATTACCATACATTGAAGCGTATCCACAAATAGAAAATCAGAATTGGCACAAGCGATTTAAGAGCTCCTCGTCTCTGTTTTCGCCCGCGATATCATCGGACAACGTGCTTCCGGTGGTTCTGATGGAGGAGGCCGGCGTGCATCTCGTCCACTCGCTCATGGCCTGCGCGGAGGCCGTTCAATTAGGAAACGCGAGCCTCGCGGAAGGCCTCGTGAAGCATGCAGGAACCCTTGCTGCGTCGCAAGGAGGTTCAATGGGTAAAGTCGCGTCGTTCTTCGCTCAAGCTCTCGCTCGAAGAATCTACGGCTTCTACCCTCACGAGACACTAGACTCTTCCTACTCCGACATGCTGCACACACATTTCTACGAATCGAGCCCGTACCTCAAATTCGCGCACTTCACGGCAAACCACGCCATCCTCGAAGCCTTCGCCGCCGCGGACACGGTGCATGTTATCGATTTTGGCCTGAAGCAGGGGTTGCAATGGCCGGCGTTCATGCAAGCGCTCGCGGTCCGTCCGGGAGGTCCGCCAGCGTTCCGTCTCAGTGGAATAGGACCGCCGCGGCTCGACGACCCCGATTCCGACACGCTTAGTCAGGTTGGTTTGAAACTGGCGGAACTCGCTCGAAAAGTTAGGATTCAATTCGAGTTCCGCGGATTTGTGTGTAACAGTTTAGCGGATCTAGATCCGTCGATGCTCGAGATCCGAGCCGGAGAATTCGTCGCGGTTAACTCTATCTTCGAGCTTCACCGCTTACTGGCGCGACCGGTTGACATTGAAAAGGTGTTAGAAACGATTAAGAGGATTAAGCCGGAGATTGTTACCGTGGTGGAGCAAGAAGCGAACCACAACAGTCCGGTTTTTCTGGAGCGGTTCACGGAGGCTTTGTACTATTACTCGAGTTTGTTTGACTCGTTGGAGGGATCAGTGGCAGCGTCTAGTGAAGAGGCGTTGGTGATGGCGGAGATGTACTTGGGGAGGCAGATATGTAACGTTGTGGCATGTGAGGGGGATGAGCGCGTGGAGAGGCACGAAACGCTGGGTCAGTGGAGAGGGCGGTTCGGTTTGGGCGGGTTCGAAGCGGTTCGTTTGGGTTCGAACGCGTTCAGACAAGCGAGGATGTTGCTGGGCCTATACGCCGAGGGGGGAAAAGGGTATCGAGTGGAAGAAAACAATGGGTGCCTCTTGCTTGGGTGGCACACTAGGCCACTCGTTGCCTCGACCGCGTGGAGACTCGCGCCCAATGGCTTGCGCTGA 1623 0.5441 MKREGMEDANAVKGECSSSGKGKVVFEEEENEDKLLAGVGYKVCSSDMVDVAHKLDQLEMVMEEDGISHLATNTVHYDPTDLYGWVQNILNNAPNHITTTTNNALIPSPLITVPENDLRAIPLPYIEAYPQIENQNWHKRFKSSSSLFSPAISSDNVLPVVLMEEAGVHLVHSLMACAEAVQLGNASLAEGLVKHAGTLAASQGGSMGKVASFFAQALARRIYGFYPHETLDSSYSDMLHTHFYESSPYLKFAHFTANHAILEAFAAADTVHVIDFGLKQGLQWPAFMQALAVRPGGPPAFRLSGIGPPRLDDPDSDTLSQVGLKLAELARKVRIQFEFRGFVCNSLADLDPSMLEIRAGEFVAVNSIFELHRLLARPVDIEKVLETIKRIKPEIVTVVEQEANHNSPVFLERFTEALYYYSSLFDSLEGSVAASSEEALVMAEMYLGRQICNVVACEGDERVERHETLGQWRGRFGLGGFEAVRLGSNAFRQARMLLGLYAEGGKGYRVEENNGCLLLGWHTRPLVASTAWRLAPNGLR* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03127 540 ProSiteProfiles GRAS family profile. 161 533 IPR005202 -
Phac8g03127 540 MobiDBLite consensus disorder prediction 1 20 - -
Phac8g03127 540 Pfam Transcriptional regulator DELLA protein N terminal 33 92 IPR021914 -
Phac8g03127 540 Pfam GRAS domain family 170 533 IPR005202 -
Phac8g03127 540 Gene3D - 31 92 IPR038088 -
Phac8g03127 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 142 528 IPR005202 -
Phac8g03127 540 SMART DELLA_2 33 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03127 Phac-Chr8 39873087 39875869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03127 32 535 GRAS Transcription Factor Family AT2G01570 55.210 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac8g03127 GRAS 2.1e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03127 K14494 - gmx:100799695 655.21