Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03112 ATGAGTTTCTGTTCTGATCATACCGAGGGTGTTTCCAATGCACATGTTTCCTCTGCAGTTGGAAATGACTGTTTTGAGCACAAAAGGCTCAAACTCATGACCCTTTTGAGAAAAATCATGTGGGACTTTGCCTTGGCATGTGTTGGTGTTGGTCCTAGTGGTGACAACAACGACCATAACGGTCAAAGGAAGACCACTTTGGAGCATAACAAGGCGTGGTTGCTGGCGGAGTCTGGAGCAGAATTGGCAAGTGCTGACCCTCAATCGGTTCACTCATCTTTCAGGTTCAGCTTCTGCTCTCAGGTAGAGGTTGAGTCCTTCAACATGAGCTCTTCTGCTTCTGCTGCTGCCGCTGCAACCTTTTTGATGGAACATTTGGAATATGAATCTCAAGTTAAGGAGCTGAAATGGAGAACACGTTCACTGGAGAAAAGCATATCTCCAGTCTTCAACCCTTTGACCAGGTTCAGCTATGGTGAAATTCTGTCAGCTACTCAAAAATTTTCCAAAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTTTAGAGGAAGAGTTGGGCTATGGAGGACTGCTGTTGCTATTAAAAGGTTGGACAAGGAAGACAAGGAGTGTGCTAAGGCGTTTTGTAGAGAACTGATGATTGCTAGTTCTCTTCATAACACAAATGTTGTTCCTCTAGTGGGGTTCTGTATTGACTCAGAGGAGGGTTTGTTTTTGGTATACAAGTATGTGTCAGGGGGCAGCTTAGAGCATCACTTGCATGGGAAGAAGAAAAGTGTGAAGGGTAGTTCACCACTTCCATGGTCTGTGAGATATCAAGTTGCAATTGGGATTGCAGAAGCCGTGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGACATTAAGCCTTCAAACATTCTTCTCTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGATTAGCTACATGGACTTCTGCCCCGTCAGTTCCTTTTCTTTGCAAAACTGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTTTGGGAGTTGTTTTATTGGAACTCTTAACTGGCCGCAAGCCAATTGAAGCAAAAAGACCCCCTGGAGAGGAAAACTTGGTAGTATGGGTGAGTAAATGA 1182 0.4374 MSFCSDHTEGVSNAHVSSAVGNDCFEHKRLKLMTLLRKIMWDFALACVGVGPSGDNNDHNGQRKTTLEHNKAWLLAESGAELASADPQSVHSSFRFSFCSQVEVESFNMSSSASAAAAATFLMEHLEYESQVKELKWRTRSLEKSISPVFNPLTRFSYGEILSATQKFSKERVLGRGALSCVFRGRVGLWRTAVAIKRLDKEDKECAKAFCRELMIASSLHNTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGKKKSVKGSSPLPWSVRYQVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELLTGRKPIEAKRPPGEENLVVWVSK* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03112 393 SMART serkin_6 168 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03112 393 FunFam probable serine/threonine-protein kinase PBL7 130 245 - -
Phac8g03112 393 Pfam Protein kinase domain 168 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03112 393 SUPERFAMILY Protein kinase-like (PK-like) 153 382 IPR011009 -
Phac8g03112 393 PANTHER OS01G0750732 PROTEIN 95 391 - -
Phac8g03112 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Phac8g03112 393 Gene3D Phosphorylase Kinase; domain 1 153 245 - -
Phac8g03112 393 ProSiteProfiles Protein kinase domain profile. 168 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03112 393 Gene3D Transferase(Phosphotransferase) domain 1 246 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03112 Phac-Chr8 39797319 39800351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03112 154 391 Trihelix Transcription Factor Family AT1G70460 44.118 4.87e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac8g03112 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03112 - - gmx:100802176 662.529