Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03106 ATGGCACTATCTTTGACATCTCATGGGGTCAACCAGTACCAAAAGTGTGGGGTTGAAGAGGAAGATGGCTCACAAAGTACTAATGGCCTCAGCAATGATTCAGCTTCAGCCATAACTCAGTGTCCTCCTCTATGTGGCATTGGCAATGACTATGTTCAAAAGACCACGCATTGCCATCTTGAAGAAGCAGAATCTCTGATCAATTTCAAAGCCAATGAGTTCAGCAACCTCATGCAAGGTAGTGAGTCTTTTCTTAGCTTTCAGCAGAGTTGGCTGTTTTCCAAAGAGAGTAATTTGCATGAAGGTTGTGACCAATGGAACCATGTTAGTCCCAAAAGCACCACAGACATGCGCCTGGTCCAAAATTTCAGTTGCTCTGAAACTGCTACTTGCTACAGCTCCATGTTCAAAGGTGCAAAAGAGAAGCAGCAACATGGTGAAAGTTCATCTTCTGGGTGGCTATACTCAGAACCAAATGGCCACAGTGATAGCCTGAATGAGTCAGCAGCACAAGAATTAGTCTTGAGAAAGCGATCTTTTATGGGAGAGACCATGCAAGCTGCCAATGCCAAGAAGCCATGCACAACTGCAAGTAAAGCAACAAAACCAAAGTCAAGCCCATCCAAGGATCCTCAAAGTGTTGCTGCCAAGAACAGAAGAGAGAGAATAAGTGAGCGGCTTAAGATACTCCAAGAACTGGTCCCTAACGGCTCCAAGGTTGATTTGGTCACCATGTTGGAGAAAGCAATTAGTTATGTGAAGTTTCTTCAGTTGCAAGTGAAGGTGGGACTAGCACACAATGCACTAATTTCCTTCTTCTTTTGA 825 0.4424 MALSLTSHGVNQYQKCGVEEEDGSQSTNGLSNDSASAITQCPPLCGIGNDYVQKTTHCHLEEAESLINFKANEFSNLMQGSESFLSFQQSWLFSKESNLHEGCDQWNHVSPKSTTDMRLVQNFSCSETATCYSSMFKGAKEKQQHGESSSSGWLYSEPNGHSDSLNESAAQELVLRKRSFMGETMQAANAKKPCTTASKATKPKSSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVGLAHNALISFFF* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03106 274 MobiDBLite consensus disorder prediction 189 213 - -
Phac8g03106 274 SMART finulus 213 262 IPR011598 GO:0046983
Phac8g03106 274 CDD bHLH_AtIND_like 208 262 - -
Phac8g03106 274 MobiDBLite consensus disorder prediction 186 219 - -
Phac8g03106 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 256 IPR011598 GO:0046983
Phac8g03106 274 FunFam Transcription factor bHLH83 205 264 - -
Phac8g03106 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 267 IPR036638 GO:0046983
Phac8g03106 274 Gene3D - 202 263 IPR036638 GO:0046983
Phac8g03106 274 Pfam Helix-loop-helix DNA-binding domain 217 257 IPR011598 GO:0046983
Phac8g03106 274 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 66 262 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03106 Phac-Chr8 39771895 39773639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03106 60 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 42.791 7.97e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac8g03106 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03106 - - gmx:106795957 401.364