Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03105 ATGGCACTATCTTTGACATCTCATGGGGTCAACCAGTACCAAAAGTGTGGGGTTGAAGAGGAAGATGGCTCACAAAGTACTAATGGCCTCAGCAATGATTCAGCTTCAGCCATAACTCAGTGTCCTCCTCTATGTGGCATTGGCAATGACTATGTTCAAAAGACCACGCATTGCCATCTTGAAGAAGCAGAATCTCTGATCAATTTCAAAGCCAATGAGTTCAGCAACCTCATGCAAGGTAGTGAGTCTTTTCTTAGCTTTCAGCAGAGTTGGCTGTTTTCCAAAGAGAGTAATTTGCATGAAGGTTGTGACCAATGGAACCATGTTAGTCCCAAAAGCACCACAGACATGCGCCTGGTCCAAAATTTCAGTTGCTCTGAAACTGCTACTTGCTACAGCTCCATGTTCAAAGGTGCAAAAGAGAAGCAGCAACATGGTGAAAGTTCATCTTCTGGGTGGCTATACTCAGAACCAAATGGCCACAGTGATAGCCTGAATGAGTCAGCAGCACAAGAATTAGTCTTGAGAAAGCGATCTTTTATGGGAGAGACCATGCAAGCTGCCAATGCCAAGAAGCCATGCACAACTGCAAGTAAAGCAACAAAACCAAAGTCAAGCCCATCCAAGGATCCTCAAAGTGTTGCTGCCAAGAACAGAAGAGAGAGAATAAGTGAGCGGCTTAAGATACTCCAAGAACTGGTCCCTAACGGCTCCAAGGTTGATTTGGTCACCATGTTGGAGAAAGCAATTAGTTATGTGAAGTTTCTTCAGTTGCAAGTGAAGGTGTTGGCAGCTGATGAATTTTGGCCTGTCCAAGGTGGAAAAGCTCCTGACATTTCTCAAGTAAGACAAGCCATTGATGCCATTCTTTCATCTCAATGA 882 0.4433 MALSLTSHGVNQYQKCGVEEEDGSQSTNGLSNDSASAITQCPPLCGIGNDYVQKTTHCHLEEAESLINFKANEFSNLMQGSESFLSFQQSWLFSKESNLHEGCDQWNHVSPKSTTDMRLVQNFSCSETATCYSSMFKGAKEKQQHGESSSSGWLYSEPNGHSDSLNESAAQELVLRKRSFMGETMQAANAKKPCTTASKATKPKSSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVRQAIDAILSSQ* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03105 293 FunFam Transcription factor bHLH83 205 264 - -
Phac8g03105 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 266 IPR036638 GO:0046983
Phac8g03105 293 MobiDBLite consensus disorder prediction 189 213 - -
Phac8g03105 293 SMART finulus 213 262 IPR011598 GO:0046983
Phac8g03105 293 MobiDBLite consensus disorder prediction 186 219 - -
Phac8g03105 293 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 66 264 IPR045843 GO:0003700|GO:0006355
Phac8g03105 293 Gene3D - 202 264 IPR036638 GO:0046983
Phac8g03105 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 256 IPR011598 GO:0046983
Phac8g03105 293 CDD bHLH_AtIND_like 208 270 - -
Phac8g03105 293 Pfam Helix-loop-helix DNA-binding domain 217 257 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03105 Phac-Chr8 39771895 39773639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03105 60 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 48.571 3.28e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac8g03105 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03105 - - gmx:106795957 461.455