Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03103 ATGATGGAGGAGGCTCCCCCGGCAGAGGCGGTGGCCGTACGTCGAGCGTTGGAGCTGCTGCAGCTAAACGACCCCGTTTTGAGGGTCCAAGCGGCCAGGGACATCCGCCGCCTCACCAAAACCTCCCACCGCTGCCGCCGCCACCTCCGCCAGGCCGTCTCGCCACTCGTCTCCATGCTCCGAGTCGACTCGCCCGACTTCCACGAACCCGCGCTTCTCGCTCTCCTCAACCTCGCCGTACAAGACGAAAAGAACAAAATTAACATTGTGGAAGCTGGTGCATTAGAGCCAATAATCAGTTTCCTCAAGTCACAAAATCCAAATCTGCGGGAGTATGCAACTGCATCTTTACTCACTCTATCTGCCTCTCCAACCAACAAACCAATCATTAGTGCTTGTGGCGCCATTCCTCTCCTTGTAAATACTCTCAGAGATGGAAGCCCCCAAGCTAAAGTTGATGCTGTGAAGGCTCTGTCCAATTTATCAACACACCCCGATAACCTCAGCATCATTCTCGAAACAAATGCAACGCCTTTTATAGTTAGTCTTCTAAAAACCTGTAGAAAATCCTCAAAAATAGCCGAAAAATGTTCTGGTCTGATAGAATCCTTGGTGGGTTATGAGGAGGGCAGAACTGCCTTAACATCTGAAGAGGGTGGGGTTCTTGCAGTTGTGGAAGTTCTTGAAAATGGTACTCCCCAGAGTAGGGAACATGCTGTTGGAGCACTGCTGACAATGTGTCAAAGTGATAGATGTAAATACAGGGAACCAATTCTTAGAGAAGGTGTTATTCCGGGGCTTCTTGAGCTTACAGTTCAAGGAACCCCTAAATCACAGCCAAAAGCACGTACCCTTTTGCAGTTACTTAGAGAGTCTCCATATTCAAGACCTGAAGTTGAACCTGACACTCTTCAGAACATAGTGTGTGACATCATATCCCAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTGGCTGAGATGGTCCAAGTCAGCATGGAGCAGAGTTTGAGACATTTGCAGCAAAGGGCTCTTGTATGTACCCCTAGTGATATGCCTATGACAAGTTGTGCTTCTGAAGTTTCTTCAAAATAG 1104 0.4828 MMEEAPPAEAVAVRRALELLQLNDPVLRVQAARDIRRLTKTSHRCRRHLRQAVSPLVSMLRVDSPDFHEPALLALLNLAVQDEKNKINIVEAGALEPIISFLKSQNPNLREYATASLLTLSASPTNKPIISACGAIPLLVNTLRDGSPQAKVDAVKALSNLSTHPDNLSIILETNATPFIVSLLKTCRKSSKIAEKCSGLIESLVGYEEGRTALTSEEGGVLAVVEVLENGTPQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQPKARTLLQLLRESPYSRPEVEPDTLQNIVCDIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDMPMTSCASEVSSK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03103 367 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 51 93 IPR000225 GO:0005515
Phac8g03103 367 FunFam U-box domain-containing protein 4 1 349 - -
Phac8g03103 367 SUPERFAMILY ARM repeat 15 308 IPR016024 -
Phac8g03103 367 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 175 219 IPR000225 GO:0005515
Phac8g03103 367 PANTHER U BOX DOMAIN-CONTAINING 12 293 - -
Phac8g03103 367 Gene3D - 3 350 IPR011989 -
Phac8g03103 367 Pfam Armadillo/beta-catenin-like repeat 83 121 IPR000225 GO:0005515
Phac8g03103 367 Pfam Armadillo/beta-catenin-like repeat 126 162 IPR000225 GO:0005515
Phac8g03103 367 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 93 135 IPR000225 GO:0005515
Phac8g03103 367 SMART arm_5 207 248 IPR000225 GO:0005515
Phac8g03103 367 SMART arm_5 164 206 IPR000225 GO:0005515
Phac8g03103 367 SMART arm_5 82 122 IPR000225 GO:0005515
Phac8g03103 367 SMART arm_5 123 163 IPR000225 GO:0005515
Phac8g03103 367 SMART arm_5 41 80 IPR000225 GO:0005515
Phac8g03103 367 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 134 176 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03103 Phac-Chr8 39756344 39760458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03103 13 290 U-box Gene Family AT2G23140 33.214 3.53e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03103 - - gmx:100793971 623.239