Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03099 ATGTATATCCTTCTAGTCCCTTCATCCTCTCTCCTTTACAAATACATATCCATCTACCTCTCTTCTGCCATTTGTCAGACCTTCCATTCCCTTTTTTTTCTCTCTCATCACAACCTACAAAACGAAACAACTATGAGAAAACCTTGTTGTGACAAAGAAAACATCAATAAAGGAGCATGGTCTAAGCAAGAAGACCAAAAGCTCATTGACTACATCAGAGTTCATGGTGAGGGTTGTTGGCGTTCCATTCCCAAAGCTGCTGGGTTGCATCGTTGTGGCAAAAGCTGCAGGCTGAGATGGTTAAACTACTTACGACCAGATATCAAACGTGGAATCTTTGCTGAAGATGAAGAAGACCTTATCATCAAACTCCATGCCCTCCTTGGTAACAGGTGGTCACTCATTGCTGGAAGATTGCCTGGAAGGACAGACAATGAGGTGAAGAACTATTGGAATTCTCACATCCGTAGAAAACTAATAAAGATGGGGATTGATCCAAATAACCATAAGCCACACCAAAGCTTTTCTCTTCCTCATTCTTCTTCTGCAGAGGGTGCATCAAATACCGAGTCCATGAACAAAGACCACAGAGTCCCTATCTTCAAATCCCCAGTTGCTGCCACCCATCACAGGATTTCCTTCATAGAAGAAGAATCAGCAATTATTTCGTCACCTACTTTGAATCTTGACCTAACAATTGCTTTACCTTCGTCTATGATTGGTGCGTTGGAAGAGAAGGCAATACAAAATTCCGAGTCCACCAAGACACTGGACATGGAAATAGATCTCAACTGTTAA 798 0.4198 MYILLVPSSSLLYKYISIYLSSAICQTFHSLFFLSHHNLQNETTMRKPCCDKENINKGAWSKQEDQKLIDYIRVHGEGCWRSIPKAAGLHRCGKSCRLRWLNYLRPDIKRGIFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHKPHQSFSLPHSSSAEGASNTESMNKDHRVPIFKSPVAATHHRISFIEEESAIISSPTLNLDLTIALPSSMIGALEEKAIQNSESTKTLDMEIDLNC* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03099 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 159 IPR017930 -
Phac8g03099 265 ProSiteProfiles Myb-like domain profile. 52 104 IPR001005 -
Phac8g03099 265 FunFam MYB transcription factor 111 172 - -
Phac8g03099 265 ProSiteProfiles Myb-like domain profile. 105 155 IPR001005 -
Phac8g03099 265 FunFam MYB-related transcription factor 56 109 - -
Phac8g03099 265 Gene3D - 112 188 - -
Phac8g03099 265 SMART sant 109 157 IPR001005 -
Phac8g03099 265 SMART sant 56 106 IPR001005 -
Phac8g03099 265 SUPERFAMILY Homeodomain-like 54 151 IPR009057 -
Phac8g03099 265 CDD SANT 59 104 IPR001005 -
Phac8g03099 265 Gene3D - 57 109 - -
Phac8g03099 265 Pfam Myb-like DNA-binding domain 57 104 IPR001005 -
Phac8g03099 265 Pfam Myb-like DNA-binding domain 112 154 IPR001005 -
Phac8g03099 265 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 45 194 - -
Phac8g03099 265 CDD SANT 115 155 IPR001005 -
Phac8g03099 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 108 IPR017930 -
Phac8g03099 265 MobiDBLite consensus disorder prediction 170 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03099 Phac-Chr8 39726469 39728036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03099 46 239 MYB Transcription Factor Family AT4G38620 53.810 1.63e-76 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g03099 Myb_DNA-binding 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03099 K09422 - gmx:100306391 353.214