Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03094 ATGGGGTGCTGCTTCAGTGCCAAGATCAAAGCAGAGAGCCCTCCACGCAACGGTTTGAGCTCAAAGGATGGTAACACAGAAGAGGATGGCTTAAGTGGCAAGATCTCCACTCCCTCCGTGCCTCCAACTCCACGGACAGAGGGTGAGATCTTGAAGTCTTCTAATATGAAGAGCTTCACCTTTGGTGAGCTAAAAACTGCTACAAGAAACTTTCGTCCGGATAGTGTGGTGGGTGAAGGTGGGTTTGGTTGTGTTTTTAAGGGGTGGATTGATGAGCAGTCACTTGCACCAGTCAGACCAGGGACTGGATTGGTCATTGCTGTGAAGAGGCTAAACCAAGAAGGTCTGCAGGGACACAGTGAATGGTTGACAGAAATCAACTACCTGGGGCAGCTGCATCATCCTAATCTTGTGAAACTGATTGGTTACTGCTTAGAGGATGACCACAGGCTTTTGGTGTATGAGTTTTTGACCAAGGGAAGTTTGGATAACCATTTATTTAGGAGAGCTTCTTATTTTCAACCACTTTCTTGGAACATCCGAATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATATCTTCATAGCGATGAAGCAAAAGTGATATATCGAGACTTCAAAGCTTCAAATATCCTGCTTGATTCAAATTACAACGCAAAACTTTCTGATTTTGGCTTGGCAAAGGATGGACCAGCAGGTGATAAAAGCCATGTCTCTACAAGGGTAATGGGCACATATGGCTATGCTGCTCCTGAATATATTGCCACAGGTCACTTGACAAAGAAGAGTGATGTATACAGTTTTGGGGTTGTTCTGCTTGAAATTATGTCTGGCAAACGTGCCCTTGACAGCAACAGGCCAAGTGGGGAGCAAAATCTAATTGAATGGGCCAAACCATACCTCAGCAACAAACGTAGGATCTTCCAAGTCATGGATGCTCGCATTGAAGGCCAATACTCGATGCGCACTGCTATGAAAGTATCCAACCTTGCCATTCAATGCCTCTCTGTGGAGCCAAGATTTAGACCAAAAATGGATGAAGTGGTGAGAACATTGGAGGAACTTCAGGATTCTGGTGATAAAGCTGTTGCAGGGGTGGGAAGCTATCATTATCAAACTGTGAGAAGGAGTGCTCATAGCTCAAGCAGCAGTGGCTACAGACAACACAGAGGTAAACAACATGAAACAACAAAGAAGTGA 1203 0.4514 MGCCFSAKIKAESPPRNGLSSKDGNTEEDGLSGKISTPSVPPTPRTEGEILKSSNMKSFTFGELKTATRNFRPDSVVGEGGFGCVFKGWIDEQSLAPVRPGTGLVIAVKRLNQEGLQGHSEWLTEINYLGQLHHPNLVKLIGYCLEDDHRLLVYEFLTKGSLDNHLFRRASYFQPLSWNIRMKVALDAAKGLAYLHSDEAKVIYRDFKASNILLDSNYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYIATGHLTKKSDVYSFGVVLLEIMSGKRALDSNRPSGEQNLIEWAKPYLSNKRRIFQVMDARIEGQYSMRTAMKVSNLAIQCLSVEPRFRPKMDEVVRTLEELQDSGDKAVAGVGSYHYQTVRRSAHSSSSSGYRQHRGKQHETTKK* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03094 400 Gene3D Phosphorylase Kinase; domain 1 46 156 - -
Phac8g03094 400 FunFam Probable serine/threonine-protein kinase PBL8 157 371 - -
Phac8g03094 400 FunFam Serine/threonine-protein kinase BIK1 38 156 - -
Phac8g03094 400 MobiDBLite consensus disorder prediction 18 52 - -
Phac8g03094 400 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Phac8g03094 400 Gene3D Transferase(Phosphotransferase) domain 1 157 371 - -
Phac8g03094 400 MobiDBLite consensus disorder prediction 374 400 - -
Phac8g03094 400 SUPERFAMILY Protein kinase-like (PK-like) 48 354 IPR011009 -
Phac8g03094 400 Pfam Protein tyrosine and serine/threonine kinase 75 353 IPR001245 GO:0004672|GO:0006468
Phac8g03094 400 MobiDBLite consensus disorder prediction 374 388 - -
Phac8g03094 400 CDD STKc_IRAK 77 356 - -
Phac8g03094 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Phac8g03094 400 PANTHER OS01G0588500 PROTEIN-RELATED 38 357 - -
Phac8g03094 400 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03094 400 MobiDBLite consensus disorder prediction 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03094 Phac-Chr8 39691740 39696463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03094 1 365 Glycoside Hydrolase AT3G07070 45.745 2.51e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac8g03094 PK_Tyr_Ser-Thr 8.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03094 - - gmx:100775335 736.102