Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03085 ATGGCATTTGGGTTCATGGAGGTGCAGCTGGTGAAAGCAAAGGGTCTTCATGAAACCGATGTCTTTGCTCACATGGATCCGTATGTCCTGTTACAATACAAAGGTCAAGAGCGCAAGAGCCGTGTAATTCATGAGGGAGGCAGAAATCCTGAATGGAATGAGAAGTTTGTATTCAGAGTAGAATATCCTGGATCAGGTGACCAATACAAGCTCAACCTTATAATCATGGACAAGGATGTATTTTCTGCAGATGACTTTGTTGGCCAGGCTGCAGTTTATGTAAAGGATTTATTGGCAGAAGGAACAGAGAAGGGATCAGCTGAGCTTCGTCCTCACAAGTATAGTGTGGTTCGAGGTGACCAATCTTACTGTGGTGAAATTGAAGTTGGTATAACTTTCACCTTAAAGGAACAGGAATATGCTGATGATGATGATGCTGGAGGATGGAAGCAAAGTGGCTTTTAA 465 0.4301 MAFGFMEVQLVKAKGLHETDVFAHMDPYVLLQYKGQERKSRVIHEGGRNPEWNEKFVFRVEYPGSGDQYKLNLIIMDKDVFSADDFVGQAAVYVKDLLAEGTEKGSAELRPHKYSVVRGDQSYCGEIEVGITFTLKEQEYADDDDAGGWKQSGF* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03085 154 Gene3D C2 domain 3 134 IPR035892 -
Phac8g03085 154 PANTHER C2 DOMAIN-CONTAINING 1 139 - -
Phac8g03085 154 SMART C2_3c 5 106 IPR000008 -
Phac8g03085 154 Pfam C2 domain 6 103 IPR000008 -
Phac8g03085 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
Phac8g03085 154 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03085 Phac-Chr8 39655514 39658671 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03085 3 109 C2H2 Transcription Factor Family AT4G21160 28.037 3.62e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03085 - - gmx:100500493 277.33