Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03059 ATGACAGGGTTTGGCTCATCATGTGGAGCATGCAAGTTCCTAAGGAGAAAATGCACGAGTGATTGTGTATTTGCTCCTTACTTTTCCTACGACCAAGCTTCAACCCATTTTGCAGCAGTGCATAAGATTTATGGAGCTAGTAACGTCTCCAAGCTATTGTCACATCTTCCAATCCAGAATAGAAGCGATGCTGCCACCACCATATCTTATGAAGCCTTGGCTCGCGTGCATGATCCTATTTATGGCTGTGTTGCTCATATCTATGCATTGCAGCAACAGGTTGTGAACTTGCAAGAGGAGATAGATGCTCTTGGAAGCATAGTGGCAAATTCCGCAGTTAGTGTTGTGAATTCTGGCACTGTCGAAGCACCAATGTACTCAGACAACGGAATACCTTATAATATTTTGCAGCATGATGCTACAAGGACACAGTATTTTCAAAATAATCTGGCTAACTTTCTTTCACAAGATGGAAGTGCCACAGTCTGCCAAAGTTTCGACTCACAGATGAATATAGAGGTTCCTAATGCACACGTGGAAGAACCTTCCTTTGGTGATTCCAACTCCAATCCGTTAGAACAGTTCCTATCTGGAATTGACCAAGAGGTCTTCGTGAATCATCCATGGTTCAAGCATAATGCAGACATAAAGGGCTCGGAATATTGA 666 0.4294 MTGFGSSCGACKFLRRKCTSDCVFAPYFSYDQASTHFAAVHKIYGASNVSKLLSHLPIQNRSDAATTISYEALARVHDPIYGCVAHIYALQQQVVNLQEEIDALGSIVANSAVSVVNSGTVEAPMYSDNGIPYNILQHDATRTQYFQNNLANFLSQDGSATVCQSFDSQMNIEVPNAHVEEPSFGDSNSNPLEQFLSGIDQEVFVNHPWFKHNADIKGSEY* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03059 221 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Phac8g03059 221 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Phac8g03059 221 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03059 Phac-Chr8 39424356 39425482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03059 1 152 AS2 family AT5G06080 57.895 6.08e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac8g03059 LOB 6.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03059 K13945 - gmx:100787638 324.324