Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03057 ATGGCCAACCGTTGGTGGACCGGGAACGTGGCGGTGAGACCCAATGAGCCCAACTCACCGCTTCAGCCGCGAGACCTAGACAACGGCGACAACGCTAACAACGCCACTCCAACCAACAGCGGCAACAGTAACACCAACGTCAACGCTGGCGAGGATGACGACAACCCCGCAAACAACAACGACGGCGACGAGCAGAACCTTAGCAGCGGGCGACGGCCGAGGGGCAGGCCGCCGGGGTCCAAGAACAAGCCGAAGCCGCCGGTGGTGATAACGAAGGAGAGCCCTAACGCGCTGCGCAGCCACATCCTCGAAATCAGCGGCGGCAGCGACGTGGCGGATTGCATTGCCACCTTCGCCACGCGCCGCCACCGCGGCGTGTCTGTGCTCAGCGGCAACGGCGTCGTCACCAACGTCACGCTGCGCCAGCCCGCCGCGCCCGGCGGCGTCATCACGCTGCAGGGAAGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTTCTGCCGGCACCTTCACCGCCGGAGGCCACCGGGATAACCGTGTACCTCGCCGGCGGGCAGGGGCAGGTCGTTGGCGGAAGCGTGGTGGGGCCCCTGATCGCCTCGGGACCTGTGATGGTGGTGGCTGCCACCTTCGCTAATGCTACCTATGAGAGGCTGCCCCTGGAGGAGGAACAGGGCGAAGAGGACATGCAAGAGGTGAATGAAGGTGGTGGGGGTGGAACACCACCACCTTCTCAGGGTGATCAACAGCCACAAGTTCCAATGCCGGTGTATAATTTGGTGCCTAACAGTGGTGACGTGTTCTGGGGTCCTCCACCTCAACCTCGCCCTCCTCCTCCACCTTCTAATTATTGA 852 0.6326 MANRWWTGNVAVRPNEPNSPLQPRDLDNGDNANNATPTNSGNSNTNVNAGEDDDNPANNNDGDEQNLSSGRRPRGRPPGSKNKPKPPVVITKESPNALRSHILEISGGSDVADCIATFATRRHRGVSVLSGNGVVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGITVYLAGGQGQVVGGSVVGPLIASGPVMVVAATFANATYERLPLEEEQGEEDMQEVNEGGGGGTPPPSQGDQQPQVPMPVYNLVPNSGDVFWGPPPQPRPPPPPSNY* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03057 283 ProSiteProfiles PPC domain profile profile. 95 232 IPR005175 -
Phac8g03057 283 CDD DUF296 99 182 IPR005175 -
Phac8g03057 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 42 269 IPR014476 GO:0003680
Phac8g03057 283 MobiDBLite consensus disorder prediction 12 66 - -
Phac8g03057 283 MobiDBLite consensus disorder prediction 1 95 - -
Phac8g03057 283 MobiDBLite consensus disorder prediction 242 256 - -
Phac8g03057 283 FunFam AT-hook motif nuclear-localized protein 98 226 - -
Phac8g03057 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Phac8g03057 283 MobiDBLite consensus disorder prediction 267 283 - -
Phac8g03057 283 Gene3D - 98 231 - -
Phac8g03057 283 MobiDBLite consensus disorder prediction 219 283 - -
Phac8g03057 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03057 Phac-Chr8 39408268 39411794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03057 71 262 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 67.692 3.50e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03057 - - aprc:113874473 364.77