Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03053 ATGGGGTCTCACTATCAGTACTGGATGCATGTGAGGAGAGAACAAATCATGAATTCACTCCCACATAAAGCACCAATTATTGGAGATGTCAGGAAGAACAATTGGGAAGAAAGGGCTTTTGCTGAAGACGCAACTAGGAGGAGTCTTGGTTGGAGCGTGTGGCCTCCAAGATCTTACTCTTGCACCTTTTGTAAGAGAGAGTTCAGGTCTGCTCAAGCTCTTGGGGGTCACATGAATATCCACAGAAGGGACAGGGCTAGGCTCAAACAAAACCTCAGAGCTCATCACAATTATGAACCCTTTTCTCATCATTACCATCACCAAAATGATGACACCATCAAATCCTCATTAGCAACTACAATTTCAACAACCAGATCACTCTCATGTATATCCACACAACAAAACTCTGGTCAGCATAAATTTTCACCTTCTTCTTCTTCTTCTTCCTTTATCTTGGGACAATTGGGGTCTCCTAATTCAGAACAAGAAAGGGTGGTCAAAGCAAAGGAGTACAATTTTAAAGGCTTGGGATGTAGTAATTTTGTTGAAACAAGTTTGTCTGTGGGTCTGACTTCTATGTTTGGCCAAAATTCATCACCAACCGTTCCTTGTGGGGACACACCCAAAATCAGTTGCAAGAGACTAAAAAATACTATTTCTTCTCTTCCTCTTTTCCTCAGACCATGTTCAAAGGACAAAGGCCTGGCTTTTCAACCTGTGGAAATCTCACTTGGACTTCATCATGGAATCGAAGACTTGGATCTTGAACTCAGGCTAGGGAAACAGCACAAAGTTAAGTAG 801 0.4207 MGSHYQYWMHVRREQIMNSLPHKAPIIGDVRKNNWEERAFAEDATRRSLGWSVWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQNLRAHHNYEPFSHHYHHQNDDTIKSSLATTISTTRSLSCISTQQNSGQHKFSPSSSSSSFILGQLGSPNSEQERVVKAKEYNFKGLGCSNFVETSLSVGLTSMFGQNSSPTVPCGDTPKISCKRLKNTISSLPLFLRPCSKDKGLAFQPVEISLGLHHGIEDLDLELRLGKQHKVK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03053 266 Gene3D Classic Zinc Finger 55 116 - -
Phac8g03053 266 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Phac8g03053 266 SMART c2h2final6 59 81 IPR013087 -
Phac8g03053 266 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Phac8g03053 266 SUPERFAMILY beta-beta-alpha zinc fingers 56 86 IPR036236 -
Phac8g03053 266 PANTHER OS07G0101800 PROTEIN 31 262 - -
Phac8g03053 266 Pfam C2H2-type zinc finger 59 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03053 Phac-Chr8 39370573 39371713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03053 31 90 C2H2 Transcription Factor Family AT2G37740 70.000 5.28e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac8g03053 zf-C2H2_6 1.6e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03053 - - vun:114195124 284.263