Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03036 ATGCCCCTTCTTCTCCATCTCTCTGTCATTTTCATTCCTCTTCCTCCCTTTTCCCTTCCCTCATCTTCTCTCTCACAACATTGCCTTTTCCTCCTTATGGCTCCCTCTTCAGATGTCAACCATCTTTCTCATCCATGCATATACGGGGATTATATGTCTCCTCGCTCGGAGAGAAAGTCTGGTTTCATGAAATGGCTCAGTAAACTTTTCAGAGGTGGGTCCAATAGAGGAAGGGGTGGTCGTCATCTGCATGAGCCAGCAGAGGAAAGCATGGTTTGGGGAGCTCCATCAAGAGCGTTGGATGATCGTGCTAGAGCTCAGAAGGAGAAAGAGGATCTAGGGCATGCAATGGCACTTTCTTCAGCCGAAGATTTGAAGAGACCAAACGCCCATCAAGGATATAGTTGGGGACAAGACACTGGAGACGATTACTCAAAGGCACCTTTGGATACCCTTAGCTCATCTGCACACCCTCCATTTGCCCCTACACCATTTTATCCCCACGAATATAGTTTGTCATTGAACAGAAGAATATGTGGTGGCTGCAACCAAGAAATAATGTATGGAAATTGTTTGGGGTGCATGGATACGTATTTTCACCCAAATTGCTTTCGCTGTCATTCCTGTGGGTACCCCATCACTGAGCGTGAGTTTTCCTTGTCAGGGAAGCATCCGTATCATAAATCCTGCTTTAAAGAAATGACTCATCCAAAATGTGAAGTTTGCTTCCAATTTATTCCTATAAATGCAGCAGGCTTGATAGAGTACAGGTGCCACCCCTTTTGGTCCCAAAAATATTGTCCATCTCATGAATATGATAATACAGCTCGCTGCTGTAGTTGTGAAAGATTGGAGCCTCTGAACATAAAATACTATAGACTAGAAGATGGACGCAGTTTGTGTTTAGAGTGCATGGAATCTGCTATAATGGACACTGGCGATTGCCAGCCTCTTTACCATTCTATCAGAGATTATTATGAAGGAATGCAGATGAGAATAGATCAACAAATTCCCATGCTTCTAGTTGAGAGAGAAGCACTTAATGAAGCTATTGTAGGGGAGAAAAATGGTTTTCTACACTTACCAGAAACAAGGGGTTTATGCCTTTCAGAGGAGCAGACTGTGACCAGTATACATAGAAGGCCAAGAATTGGAGGCCATCGACTGATAGGGATGAGAACTCAACCTCAAAAACTGACTAGAAAATGCGAAGTTACAGCAATTCTTGTCCTATATGGTCTTCCTAGGTTACTCACAGGTGCTATACTTGCCCATGAGTTGATGCATGGCTGGCTACGCCTTAAAGGTTACCGCAACCTTAACCCTGAAGTAGAGGAAGGCATTTGTCAAGTTCTTTCCTATATGTGGCTTGAGTCAGAAGTAATGCCTAGCTTTCAAAGCATGCCATCAACATCCACAGCTTCTGCTTCTTCCTCCTCCTCCTCCTCAAAGAAGGGTGCAAAGTCTCATGTTGAAAATAAATTGGGTGAATTTTTCAAGAATCAGATTGCCAATGATTCTTCCCCAGCTTACGGTGGTGGCTTTAGAGCTGCTAATGAAGCTGTTAATAAATATGGTTTGCGTAGAACACTTGACCATATTCATTTGACTGGATTTTTTCCAGTGTAA 1629 0.4334 MPLLLHLSVIFIPLPPFSLPSSSLSQHCLFLLMAPSSDVNHLSHPCIYGDYMSPRSERKSGFMKWLSKLFRGGSNRGRGGRHLHEPAEESMVWGAPSRALDDRARAQKEKEDLGHAMALSSAEDLKRPNAHQGYSWGQDTGDDYSKAPLDTLSSSAHPPFAPTPFYPHEYSLSLNRRICGGCNQEIMYGNCLGCMDTYFHPNCFRCHSCGYPITEREFSLSGKHPYHKSCFKEMTHPKCEVCFQFIPINAAGLIEYRCHPFWSQKYCPSHEYDNTARCCSCERLEPLNIKYYRLEDGRSLCLECMESAIMDTGDCQPLYHSIRDYYEGMQMRIDQQIPMLLVEREALNEAIVGEKNGFLHLPETRGLCLSEEQTVTSIHRRPRIGGHRLIGMRTQPQKLTRKCEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPSFQSMPSTSTASASSSSSSSKKGAKSHVENKLGEFFKNQIANDSSPAYGGGFRAANEAVNKYGLRRTLDHIHLTGFFPV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03036 542 Gene3D Cysteine Rich Protein 174 238 - -
Phac8g03036 542 Pfam Protein DA1 328 536 IPR022087 -
Phac8g03036 542 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 173 204 - -
Phac8g03036 542 MobiDBLite consensus disorder prediction 467 487 - -
Phac8g03036 542 Pfam LIM domain 179 233 IPR001781 -
Phac8g03036 542 ProSitePatterns LIM zinc-binding domain signature. 179 213 IPR001781 -
Phac8g03036 542 MobiDBLite consensus disorder prediction 467 486 - -
Phac8g03036 542 CDD LIM_DA1 179 231 - -
Phac8g03036 542 PANTHER PROTEIN DA1-RELATED 2 63 541 IPR045218 -
Phac8g03036 542 ProSiteProfiles LIM domain profile. 177 237 IPR001781 -
Phac8g03036 542 SMART lim_4 178 230 IPR001781 -
Phac8g03036 542 FunFam Protein DA1-related 2 166 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03036 Phac-Chr8 39248173 39253027 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac8g03036 DA1-like 2.7e-99 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03036 - - gmx:100784976 1005.74