Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03034 ATGCCCCTTCTTCTCCATCTCTCTGTCATTTTCATTCCTCTTCCTCCCTTTTCCCTTCCCTCATCTTCTCTCTCACAACATTGCCTTTTCCTCCTTATGGCTCCCTCTTCAGATGTCAACCATCTTTCTCATCCATGCATATACGGGGATTATATGTCTCCTCGCTCGGAGAGAAAGTCTGGTTTCATGAAATGGCTCAGTAAACTTTTCAGAGGTGGGTCCAATAGAGGAAGGGGTGGTCGTCATCTGCATGAGCCAGCAGAGGAAAGCATGGTTTGGGGAGCTCCATCAAGAGCGTTGGATGATCGTGCTAGAGCTCAGAAGGAGAAAGAGGATCTAGGGCATGCAATGGCACTTTCTTCAGCCGAAGATTTGAAGAGACCAAACGCCCATCAAGGATATAGTTGGGGACAAGACACTGGAGACGATTACTCAAAGGCACCTTTGGATACCCTTAGCTCATCTGCACACCCTCCATTTGCCCCTACACCATTTTATCCCCACGAATATAGAAGAATATGTGGTGGCTGCAACCAAGAAATAATGTATGGAAATTGTTTGGGGTGCATGGATACGTATTTTCACCCAAATTGCTTTCGCTGTCATTCCTGTGGGTACCCCATCACTGAGCGTGAGTTTTCCTTGTCAGGGAAGCATCCGTATCATAAATCCTGCTTTAAAGAAATGACTCATCCAAAATGTGAAGTTTGCTTCCAATTTATTCCTATAAATGCAGCAGGCTTGATAGAGTACAGGTGCCACCCCTTTTGGTCCCAAAAATATTGTCCATCTCATGAATATGATAATACAGCTCGCTGCTGTAGTTGTGAAAGATTGGAGCCTCTGAACATAAAATACTATAGACTAGAAGATGGACGCAGTTTGTGTTTAGAGTGCATGGAATCTGCTATAATGGACACTGGCGATTGCCAGCCTCTTTACCATTCTATCAGAGATTATTATGAAGGAATGCAGATGAGAATAGATCAACAAATTCCCATGCTTCTAGTTGAGAGAGAAGCACTTAATGAAGCTATTGTAGGGGAGAAAAATGGTTTTCTACACTTACCAGAAACAAGGGGTTTATGCCTTTCAGAGGAGCAGACTGTGACCAGTATACATAGAAGGCCAAGAATTGGAGGCCATCGACTGATAGGGATGAGAACTCAACCTCAAAAACTGACTAGAAAATGCGAAGTTACAGCAATTCTTGTCCTATATGGTCTTCCTAGGTAA 1236 0.4369 MPLLLHLSVIFIPLPPFSLPSSSLSQHCLFLLMAPSSDVNHLSHPCIYGDYMSPRSERKSGFMKWLSKLFRGGSNRGRGGRHLHEPAEESMVWGAPSRALDDRARAQKEKEDLGHAMALSSAEDLKRPNAHQGYSWGQDTGDDYSKAPLDTLSSSAHPPFAPTPFYPHEYRRICGGCNQEIMYGNCLGCMDTYFHPNCFRCHSCGYPITEREFSLSGKHPYHKSCFKEMTHPKCEVCFQFIPINAAGLIEYRCHPFWSQKYCPSHEYDNTARCCSCERLEPLNIKYYRLEDGRSLCLECMESAIMDTGDCQPLYHSIRDYYEGMQMRIDQQIPMLLVEREALNEAIVGEKNGFLHLPETRGLCLSEEQTVTSIHRRPRIGGHRLIGMRTQPQKLTRKCEVTAILVLYGLPR* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03034 411 CDD LIM_DA1 174 226 - -
Phac8g03034 411 FunFam Protein DA1-related 2 162 227 - -
Phac8g03034 411 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 168 199 - -
Phac8g03034 411 Gene3D Cysteine Rich Protein 161 231 - -
Phac8g03034 411 ProSitePatterns LIM zinc-binding domain signature. 174 208 IPR001781 -
Phac8g03034 411 ProSiteProfiles LIM domain profile. 172 232 IPR001781 -
Phac8g03034 411 SMART lim_4 173 225 IPR001781 -
Phac8g03034 411 PANTHER PROTEIN DA1-RELATED 2 63 411 IPR045218 -
Phac8g03034 411 Pfam LIM domain 174 228 IPR001781 -
Phac8g03034 411 Pfam Protein DA1 323 411 IPR022087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03034 Phac-Chr8 39248173 39253027 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac8g03034 DA1-like 8.6e-37 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03034 - - gmx:100784976 791.186