Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03032 ATGGCACTTTCTTCAGCCGAAGATTTGAAGAGACCAAACGCCCATCAAGGATATAGTTGGGGACAAGACACTGGAGACGATTACTCAAAGGCACCTTTGGATACCCTTAGCTCATCTGCACACCCTCCATTTGCCCCTACACCATTTTATCCCCACGAATATAGTTTGTCATTGAACAGAAGAATATGTGGTGGCTGCAACCAAGAAATAATGTATGGAAATTGTTTGGGGTGCATGGATACGTATTTTCACCCAAATTGCTTTCGCTGTCATTCCTGTGGGTACCCCATCACTGAGCGTGAGTTTTCCTTGTCAGGGAAGCATCCGTATCATAAATCCTGCTTTAAAGAAATGACTCATCCAAAATGTGAAGTTTGCTTCCAATTTATTCCTATAAATGCAGCAGGCTTGATAGAGTACAGGTGCCACCCCTTTTGGTCCCAAAAATATTGTCCATCTCATGAATATGATAATACAGCTCGCTGCTGTAGTTGTGAAAGATTGGAGCCTCTGAACATAAAATACTATAGACTAGAAGATGGACGCAGTTTGTGTTTAGAGTGCATGGAATCTGCTATAATGGACACTGGCGATTGCCAGCCTCTTTACCATTCTATCAGAGATTATTATGAAGGAATGCAGATGAGAATAGATCAACAAATTCCCATGCTTCTAGTTGAGAGAGAAGCACTTAATGAAGCTATTGTAGGGGAGAAAAATGGTTTTCTACACTTACCAGAAACAAGGGGTTTATGCCTTTCAGAGGAGCAGACTGTGACCAGTATACATAGAAGGCCAAGAATTGGAGGCCATCGACTGATAGGGATGAGAACTCAACCTCAAAAACTGACTAGAAAATGCGAAGTTACAGCAATTCTTGTCCTATATGGTCTTCCTAGGTTACTCACAGGTGCTATACTTGCCCATGAGTTGATGCATGGCTGGCTACGCCTTAAAGGTTACCGCAACCTTAACCCTGAAGTAGAGGAAGGCATTTGTCAAGTTCTTTCCTATATGTGGCTTGAGTCAGAAGTAATGCCTAGCTTTCAAAGCATGCCATCAACATCCACAGCTTCTGCTTCTTCCTCCTCCTCCTCCTCAAAGAAGGGTGCAAAGTCTCATGTTGAAAATAAATTGGGTGAATTTTTCAAGAATCAGATTGCCAATGATTCTTCCCCAGCTTACGGTGGTGGCTTTAGAGCTGCTAATGAAGCTGTTAATAAATATGGTTTGCGTAGAACACTTGACCATATTCATTTGACTGGATTTTTTCCAGTGTAA 1281 0.42 MALSSAEDLKRPNAHQGYSWGQDTGDDYSKAPLDTLSSSAHPPFAPTPFYPHEYSLSLNRRICGGCNQEIMYGNCLGCMDTYFHPNCFRCHSCGYPITEREFSLSGKHPYHKSCFKEMTHPKCEVCFQFIPINAAGLIEYRCHPFWSQKYCPSHEYDNTARCCSCERLEPLNIKYYRLEDGRSLCLECMESAIMDTGDCQPLYHSIRDYYEGMQMRIDQQIPMLLVEREALNEAIVGEKNGFLHLPETRGLCLSEEQTVTSIHRRPRIGGHRLIGMRTQPQKLTRKCEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPSFQSMPSTSTASASSSSSSSKKGAKSHVENKLGEFFKNQIANDSSPAYGGGFRAANEAVNKYGLRRTLDHIHLTGFFPV* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03032 426 MobiDBLite consensus disorder prediction 351 370 - -
Phac8g03032 426 MobiDBLite consensus disorder prediction 1 22 - -
Phac8g03032 426 PANTHER PROTEIN DA1-RELATED 2 8 425 IPR045218 -
Phac8g03032 426 SMART lim_4 62 114 IPR001781 -
Phac8g03032 426 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 57 88 - -
Phac8g03032 426 MobiDBLite consensus disorder prediction 351 371 - -
Phac8g03032 426 CDD LIM_DA1 63 115 - -
Phac8g03032 426 Gene3D Cysteine Rich Protein 58 122 - -
Phac8g03032 426 Pfam Protein DA1 212 420 IPR022087 -
Phac8g03032 426 Pfam LIM domain 63 117 IPR001781 -
Phac8g03032 426 ProSitePatterns LIM zinc-binding domain signature. 63 97 IPR001781 -
Phac8g03032 426 ProSiteProfiles LIM domain profile. 61 121 IPR001781 -
Phac8g03032 426 FunFam Protein DA1-related 2 50 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03032 Phac-Chr8 39248173 39251879 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac8g03032 DA1-like 1.5e-99 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03032 - - gmx:100784976 845.884