LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac8g03026	ATGACAGGAATGGATGGTGTGGTGTCTGTTATTCCAAATAGAGTCTACAATGTCCAAACATCAAGGTCCTGGGACTTCCTTAACTTCCCTGAAAATGTCCCAAGAACAAATTTAGAAGGGAACACAATTGTTGGGGTAATCGATAGTGGAATTTGGATTCCTAATTCCAATAGCTTTACTGATGGAGGCTTTGCTCCACCACCACCGAAATGGAAGGGAACATGCGATAACTTCACTTGCAATAACAAAGTAATTGGAGCAAGATATTTTCGCATTGGGGGTCAGTTCAGGCCACAGGACATCATATCTCCAGCTGATACTACTGGTCACGGGTCTCACTGTGCATCCATTGCTGCTGGAAACCGTGTTCCCAATGCAAATCTGTTTGGGCTTGGCTCAGGAATAGCAAGAGGAGGAGTTCCATCAGCACGCATTGCTGTGTATAAAGTTTGTTGGACAGCGGGTTGTCAAACTGCTGACATTCTTGCAGGATTTGATGCAGCCATTGCGGATGGTGTTGATATTATTTCTATTTCAGTGGGACCAACATCCGTCGTACACCAGGAATATTTTAATGATGACATTGCAATAGGAGCTTACCATGCAATGAAGAATGGCATATTAACTTCTAAAACTGCAGACAATTTGGGTCCAAATCGTTACACAATGTCGAATGTTGCACCCTGGTTCCTTTCTGTGGCTGCCACCACTATAGACAGAAAGTTTTTCACCGATCTCCGACTGGGCAATGGCCAGATCATGCAGGGAATTTCAGTGAATACATTTAGTCCACCACAGAATGGTTACCCTCTAATTTTTGGTGGAGATGTACCAGCTCCTGGATTTAATAGTTCCCAATCCAGGACTTGCCGTGACAATTCTTTGAATGGAGCTTTGATGAGAGGGAAAATTGTTTTGTGCGATGGCTATACTTCTTCTTCCCGTCTGGGATTTGCTTCTGGGGCTGCTGGTGTTATATTCACAAGTACATTGCCTTTAGTTGTCGCAGATGTATTTGCATTGCCAACAGTTCACGTTAGCCCAAGGGATGGACAATCCGTATATAATTATTTAAAGTCAACAAGTAATCCAACAGCTATCATATCCAAGAGTTACGAAGGAATAGACTCAGCAGCCTCTTTCATTGCTCCTTTCTCATCAAGAGGTCCAAATAGGATCACTCCAAACATTCTTAAGCCTGATATAGCAGCTCCAGGAGTTGACATTCTGGCTGCATGGTCTCCAATTTCTCCAATTTCTTCAGTTAAAGGAGATAGTAGAACATCGTATTTCAATATAATATCTGGAACTTCAATGGCATGCCCTCATGTTACTGCAGCAGCGGTTTACGTCAAATCATTTCATCCCAGCTGGTCTCCTGCTGTACTTAAATCCGCATTGATGACAACTGGTAATGGTCTCCTTGCCATCCGTGCATGCTAA	1443	0.4317	MTGMDGVVSVIPNRVYNVQTSRSWDFLNFPENVPRTNLEGNTIVGVIDSGIWIPNSNSFTDGGFAPPPPKWKGTCDNFTCNNKVIGARYFRIGGQFRPQDIISPADTTGHGSHCASIAAGNRVPNANLFGLGSGIARGGVPSARIAVYKVCWTAGCQTADILAGFDAAIADGVDIISISVGPTSVVHQEYFNDDIAIGAYHAMKNGILTSKTADNLGPNRYTMSNVAPWFLSVAATTIDRKFFTDLRLGNGQIMQGISVNTFSPPQNGYPLIFGGDVPAPGFNSSQSRTCRDNSLNGALMRGKIVLCDGYTSSSRLGFASGAAGVIFTSTLPLVVADVFALPTVHVSPRDGQSVYNYLKSTSNPTAIISKSYEGIDSAASFIAPFSSRGPNRITPNILKPDIAAPGVDILAAWSPISPISSVKGDSRTSYFNIISGTSMACPHVTAAAVYVKSFHPSWSPAVLKSALMTTGNGLLAIRAC*	481

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac8g03026	480	Pfam	Subtilase family	42	471	IPR000209	GO:0006508\|GO:0008236
	Phac8g03026	480	Gene3D	-	239	375	-	-
	Phac8g03026	480	CDD	PA_subtilisin_like	245	368	-	-
	Phac8g03026	480	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	110	120	IPR022398	-
	Phac8g03026	480	CDD	Peptidases_S8_3	16	470	IPR034197	-
	Phac8g03026	480	Gene3D	Peptidase S8/S53 domain	42	472	IPR036852	GO:0004252\|GO:0006508
	Phac8g03026	480	ProSitePatterns	Serine proteases, subtilase family, serine active site.	436	446	IPR023828	-
	Phac8g03026	480	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	4	471	IPR045051	-
	Phac8g03026	480	SUPERFAMILY	Subtilisin-like	19	472	IPR036852	GO:0004252\|GO:0006508
	Phac8g03026	480	ProSiteProfiles	Serine proteases, subtilase domain profile.	23	480	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac8g03026	Phac-Chr8	39204153	39207399	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac8g03026	5	472	Subtilisin-like Serine Gene Family	AT5G03620	48.560	2.61e-141	416

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac8g03026	-		-	var:108336584	720.694

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