LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac8g03024	ATGAAATCTTTAGGATTGTCGCATCTTCTTCAAATTCTTACATACATTCTGCTATTGACTCCCTCATTTTCTAAAGATGATCGAAAGCTTTACATAGTCTACATGGGAGAATATCCAAAGGACATGGAAATCACAGATTCATTTCATACCAGTATGGTTCAAAGTGTCCTGGGCAGCAAATTTACATCAGATGCTTTGCTGCACCGCTACAAGACTTTCAATGGATTTGTGGCGAGACTAACCAAAGAAGAATCAGAAAGAATGGCAGGAATGGATGGTGTCGTGTCTGTTATTCCAGAAAGAGTCTACAGTGTCCAAACATCAAGGTCCTGGGACTTCATTAACTTCCCTGAAAATGTCCCAAGAACAAATGTAGAAAGTGACACAATTGTTGGAGTAATCGATAGTGGAATTTGGGCTAATTCCGGTAGCTTTACTGATGGAGGCTTTGGTCCACCACCACAGAAATGGAAGGGAATATGCGATAACTTCAGTTGCAATTACAAAGTAATTGGAGCACGATATTTTCGCATTGGGGGTCAGTTCAAGCCAGATGACATCATATCTCCAGCTGATACTACTGGTCACGGGTCTCACTGTGCATCCATTGCTGCTGGAAACCGTGTTCCCAATGCAAATCTGTTTGGACTTGGCTCAGGAATAGCAAGAGGAGGAGTTCCATCAGCACGCATTGCTGTGTATAAAGTTTGTTGGTCATCGGGTTGTATGAATACTGACATTCTTGCAGGATATGATGCAGCCATTGCGGATGGTGTTGATATTATTTCAATTTCAGTGGGACCAACAGAGGTCCAACACCTGGAATATTTTGATGATGAATCTGCAATAGGAGCTTACCATGCAATGAAGAATGGCATATTAACTTCTAAAACTGCAGACAATTTGGGTCCAAATCGTTACACAATGGTGAATCTTGCACCCTGGTTCCTTTCTGTGGCTGCCACCACTATAGACAGAAAGTTTTTCACTGATCTCAAACTGGGCAATGGCCAGATCATCCAGGGAGTTTCAGTGAATACATTCATTCCAACACAGACTAATGGTTACCCTTTAGTTTTTGGTGGAGATGTACCAGCTCCTGGATTTAATAGTACCGAGTCCAGTACGTGCACTGATGATTCATTAGATGGAGCTTTGGTGAGAGGGAAAATTGTTTTTTGTGATGGCTATTATTCTTCTGAACGTGTGAGATTTGCTTCTGGGGCTGCTGGTGTCATATTCAGCAGTTCATGGCCTTTAGTTGCCGGAGATATATTTGCATTGCCAGCAATTCACATGAACTTAAGGGATGGAGAGTCCGTATATAATTATTTAAGGTCAACAAGTAATCCAACAGCTATCATATCCCAGAGTTACGAAGGAATAGACTCAGCAGCCCCTTACATTGCTCCTTTCTCATCAAGAGGTCCAAATAGGATCACTCCAAACATTCTTAAGCCTGATATAGCAGCTCCAGGAGTTGACATTCTGGCTGCATGGTCTCCAATTTCTCCTATTTCTTCAGTTAAAGGAGATTGGAGAAAATCGTATACGAATATAATATCTGGAACTTCAATGGCATGCCCTCATGTTACTGCAACAGCTGTTTACGTCAAATCATTTCATCCCAACTGGTCTCCTGCTGTACTTAAATCTGCATTGATGACAACTGCTACTCCTCTGAATCCTGCACTTAATTCGGATGCTGAATTTGCTTACGGTGCGGGGCAAATCAATCCTTTGAAGGCAGTAAATCCTGGACTAGTTTATGATGCTGGTCCGAATGATTATATTAATTTTCTTTGTGGACAAGGTTATAGTACAACAACGCTGCGAAAAATTACAGGAGATAGCAGCACTTGTACATCAGCAAATAGAGGATCTGTTTTCAACCTTAACCTCCCATCTTTTGCTCTAGCAACCGCTCCCTTAAGTTACAACGATGTCACTTTTGGTAGAATTGTCACTAATGTTGGATCTGCTACATCTACATATAGGGCAATAGTATCTGGATATCCATCTTCTTTAAACATCCAAGTAGTGCCAAATGTTTTGACCTTCACATATGTGGGTCAGAGACTGTCCTTCACCCTTAGGATTCAAGGAACCATTGATGCAGACTTGGTTTCTTCTTCTTTGACTTGGGATGATGGCACTCATCAGGCAAGGAGCCCCATTGTTGTTTATGTTCCATAA	2196	0.4158	MKSLGLSHLLQILTYILLLTPSFSKDDRKLYIVYMGEYPKDMEITDSFHTSMVQSVLGSKFTSDALLHRYKTFNGFVARLTKEESERMAGMDGVVSVIPERVYSVQTSRSWDFINFPENVPRTNVESDTIVGVIDSGIWANSGSFTDGGFGPPPQKWKGICDNFSCNYKVIGARYFRIGGQFKPDDIISPADTTGHGSHCASIAAGNRVPNANLFGLGSGIARGGVPSARIAVYKVCWSSGCMNTDILAGYDAAIADGVDIISISVGPTEVQHLEYFDDESAIGAYHAMKNGILTSKTADNLGPNRYTMVNLAPWFLSVAATTIDRKFFTDLKLGNGQIIQGVSVNTFIPTQTNGYPLVFGGDVPAPGFNSTESSTCTDDSLDGALVRGKIVFCDGYYSSERVRFASGAAGVIFSSSWPLVAGDIFALPAIHMNLRDGESVYNYLRSTSNPTAIISQSYEGIDSAAPYIAPFSSRGPNRITPNILKPDIAAPGVDILAAWSPISPISSVKGDWRKSYTNIISGTSMACPHVTATAVYVKSFHPNWSPAVLKSALMTTATPLNPALNSDAEFAYGAGQINPLKAVNPGLVYDAGPNDYINFLCGQGYSTTTLRKITGDSSTCTSANRGSVFNLNLPSFALATAPLSYNDVTFGRIVTNVGSATSTYRAIVSGYPSSLNIQVVPNVLTFTYVGQRLSFTLRIQGTIDADLVSSSLTWDDGTHQARSPIVVYVP*	732

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac8g03024	731	Gene3D	-	325	462	-	-
	Phac8g03024	731	CDD	PA_subtilisin_like	331	455	-	-
	Phac8g03024	731	Gene3D	-	601	730	-	-
	Phac8g03024	731	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	20	105	IPR037045	-
	Phac8g03024	731	CDD	Peptidases_S8_3	103	559	IPR034197	-
	Phac8g03024	731	Pfam	Subtilase family	127	576	IPR000209	GO:0006508\|GO:0008236
	Phac8g03024	731	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	196	206	IPR022398	-
	Phac8g03024	731	PRINTS	Subtilisin serine protease family (S8) signature	126	145	IPR015500	-
	Phac8g03024	731	PRINTS	Subtilisin serine protease family (S8) signature	522	538	IPR015500	-
	Phac8g03024	731	PRINTS	Subtilisin serine protease family (S8) signature	192	205	IPR015500	-

Showing 1 to 10 of 17 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac8g03024	Phac-Chr8	39176083	39184185	Dispersed/Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac8g03024	27	729	Subtilisin-like Serine Gene Family	AT5G59100	46.122	0.0	596

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac8g03024	-		-	vum:124828449	1047.73

Showing 1 to 1 of 1 entries