Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03004 ATGTTGGTCACTACTGAGGACAAGTCTCATGTTGTTGTTGTTGTTGACATACACAGTAATGGCTGTTGTCACCGGAGCTCGGCCGCCGACGAGGGGTGTTCTGACGCCACCGACCAGTCACATGAGGGGCAAAGCTCTTCCCATGATCCTGGCACTGAGATAGTGGGAGTGTGTGAGAAGGAGAGAGGATCCTCTGCTTCAGAGTGTTCAGTGGAGGTGGATCTGGAGGAGGGTTCAGTCCCCGAAGTTAAGGTGCATTTGGATAATGTGGAGAGGGATTGTAGGATTTGCCATCTCAGCATGGATATGACCAACCATGAATCTGGAACTCCCATTGAGCTGGGATGCTCTTGCAAGGATGATTTGGCTGCTGCTCACAAGCAGTGTGCTGAGGCTTGGTTCAAGATCAAGGGCAATAAAACATGTGAAATATGTGGATCAATTGCACGCAATGTAGCTGGAGCTATTGAAATTCAAATGACAGAACAATGGAATGAGGCAAATGATGCTTCCACGGTACCACCATCAGGAACAGCACCACCCACAGAAACTCGAAATTTCTGGCAGGGTCACCGTTTTTTGAATTTCCTACTAGCCTGTATGGTCTTTGCCTTTGTCATATCATGGCTCTTTCACTTTAATGTACCCTCTTGA 654 0.4786 MLVTTEDKSHVVVVVDIHSNGCCHRSSAADEGCSDATDQSHEGQSSSHDPGTEIVGVCEKERGSSASECSVEVDLEEGSVPEVKVHLDNVERDCRICHLSMDMTNHESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIARNVAGAIEIQMTEQWNEANDASTVPPSGTAPPTETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03004 217 Pfam RING-variant domain 94 145 IPR011016 GO:0008270
Phac8g03004 217 PANTHER ZINC FINGER, RING-CH-TYPE 20 216 - -
Phac8g03004 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 154 IPR013083 -
Phac8g03004 217 SMART ringv_2 93 146 IPR011016 GO:0008270
Phac8g03004 217 MobiDBLite consensus disorder prediction 33 53 - -
Phac8g03004 217 MobiDBLite consensus disorder prediction 33 51 - -
Phac8g03004 217 SUPERFAMILY RING/U-box 91 148 - -
Phac8g03004 217 ProSiteProfiles Zinc finger RING-CH-type profile. 86 152 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03004 Phac-Chr8 38908973 38912623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03004 57 217 C3H Transcription Factor Family AT5G05830 67.901 1.07e-75 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03004 - - gmx:100818979 375.17