Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02993 ATGGAATTGGAAACCCTCTACCCTCCTTGTTTTATGCCAGATTCAAATTGGTTTGTGCAAGAAAGCCACACCACAGAATGGACTAGAGAGGATAACAAGAAGTTTGAAAGTGCCCTTGCTATATATGACAAGGACACCCCAGATAGATGGTTTAAGGTGGCAGCCATGATCCCTGGGAAGACTGTGTTCGATGTGATCAAGCAGTATAGGGAATTGGAAGAAGATGTGAGTGAAATTGAAGCAGGGCGTGTTCCAATTCCTGGTTATCTTGCCTCTTCTTTCACCTTTGAGCTTGTTGACAACCACAACTATGATGGATGCAGAAGAAGGCCTGCCCCTATCAGAGGTTCTGATCAAGAGAGGAAGAAAGGGGTTCCCTGGACTGAAGAGGAACACAGACGTTTTCTGATGGGACTTCTAAAGTATGGTAAAGGAGACTGGAGAAATATCTCTCGCAATTTTGTGGTCACAAAGACTCCCACCCAAGTTGCTAGCCATGCACAGAAGTACTACATAAGGCAAAAGGTTTCTGGAGGGAAAGATAAAAGAAGACCTAGCATCCATGATATAACCACTGTTAACCTTACAGAAACTGCTGCATCAGATAAGATCAAGTCTCCGTTATTTAACTTGTCGCCCATGATTACACCACAGCAGAAGCTGAATAGTATGTCAAAAGTACAGTTCGACTGGACTAGCCACTGCAATGATGGATCACTCATGGTTTTCAACCCAAATACTGATAACTTGTTTGTGTCCTCCTCATCTGATATCACTTCCATGGCCCTGAAAATGCAAGGGCAGGATCTCTATGACTGTGCTTTACATGAGGCTTATGCCAAGATAAAGGTTCCTGGTTTCGGCATGGCTCCTAGAGACTTCAATAATGAAGCTGTTTTCGGTATTCATGCACTGTAG 918 0.4368 MELETLYPPCFMPDSNWFVQESHTTEWTREDNKKFESALAIYDKDTPDRWFKVAAMIPGKTVFDVIKQYRELEEDVSEIEAGRVPIPGYLASSFTFELVDNHNYDGCRRRPAPIRGSDQERKKGVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSGGKDKRRPSIHDITTVNLTETAASDKIKSPLFNLSPMITPQQKLNSMSKVQFDWTSHCNDGSLMVFNPNTDNLFVSSSSDITSMALKMQGQDLYDCALHEAYAKIKVPGFGMAPRDFNNEAVFGIHAL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02993 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 175 IPR017930 -
Phac8g02993 305 CDD SANT 26 72 IPR001005 -
Phac8g02993 305 FunFam transcription factor MYB1R1 125 176 - -
Phac8g02993 305 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 20 250 IPR043363 -
Phac8g02993 305 Gene3D - 125 176 - -
Phac8g02993 305 SMART sant 23 75 IPR001005 -
Phac8g02993 305 SMART sant 123 173 IPR001005 -
Phac8g02993 305 SUPERFAMILY Homeodomain-like 121 175 IPR009057 -
Phac8g02993 305 Gene3D - 19 86 - -
Phac8g02993 305 ProSiteProfiles SANT domain profile. 127 175 IPR017884 -
Phac8g02993 305 SUPERFAMILY Homeodomain-like 25 79 IPR009057 -
Phac8g02993 305 Pfam Myb-like DNA-binding domain 126 170 IPR001005 -
Phac8g02993 305 CDD SANT 126 170 IPR001005 -
Phac8g02993 305 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Phac8g02993 305 FunFam Transcription factor SRM1 19 86 - -
Phac8g02993 305 ProSiteProfiles SANT domain profile. 22 77 IPR017884 -
Phac8g02993 305 NCBIfam myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02993 Phac-Chr8 38831125 38833365 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g02993 Myb_DNA-binding 1.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02993 - - gmx:778039 580.096