Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02988 ATGCGCACGGATTGGGATCTTTATGGTTCAGATAATCTCAGAACTAATAAAGTTGAGTTCAGAGGCAGAGAGAGAGAGAGAGAGAGAGAATCATATCTGGAAGAAAACATGGACGAGGGCATGTCAGGCTTTTGCATCAGATCAGGAAGTGTCCGTGGTAAAAGTGGAAGCACTACTTCTTCTGCCACTGGCACCAAGTGTGGGCGTTGGAATCCCACCACTGAACAGGTTAAACTTCTAACTGAACTCTTCAGGTCAGGGCTCCGCACTCCAAGCACTGACCAGATTCAAAAGATCTCCACTCAGCTCAGCTTTTATGGTAAGATAGAGAGCAAGAATGTCTTCTATTGGTTTCAGAACCATAAGGCCAGGGAAAGACAGAAGCGCCGCAAGGTCTCCTTTGATGACAAGGATCTCATTCGTAGACAAAACTCCTTCAACACTTCCACACAAAGTCTTGCTGATACGTATCGAGTTTCAGAGCCAGATAGGGTGATTGAGACTCTTCAACTCTTTCCCTTGAACTCCTTTGGTGAATCTGAACCAGAGAACCTAAGGCTACATGCAAATGAATGTAGGGATAGTAGTACAATGTTTTCATACATGATGGATGAACAAATAGAGCACCCACCATTGGACCTGCGCTTGAGCTTTCTGTAA 660 0.4485 MRTDWDLYGSDNLRTNKVEFRGRERERERESYLEENMDEGMSGFCIRSGSVRGKSGSTTSSATGTKCGRWNPTTEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDKDLIRRQNSFNTSTQSLADTYRVSEPDRVIETLQLFPLNSFGESEPENLRLHANECRDSSTMFSYMMDEQIEHPPLDLRLSFL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02988 219 ProSiteProfiles 'Homeobox' domain profile. 63 128 IPR001356 GO:0003677
Phac8g02988 219 FunFam WUSCHEL-related homeobox 11 66 134 - -
Phac8g02988 219 SUPERFAMILY Homeodomain-like 68 130 IPR009057 -
Phac8g02988 219 CDD homeodomain 69 129 IPR001356 GO:0003677
Phac8g02988 219 Pfam Homeodomain 67 127 IPR001356 GO:0003677
Phac8g02988 219 Gene3D - 66 134 - -
Phac8g02988 219 SMART HOX_1 65 132 IPR001356 GO:0003677
Phac8g02988 219 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 54 145 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02988 Phac-Chr8 38717444 38718682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02988 44 219 Wox Gene Family AT3G11260 54.167 1.05e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac8g02988 Homeodomain 8.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02988 - - pvu:PHAVU_008G226100g 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02988 8 38717444 38718682 Phac8g02988 8 38717444 38718682 ECH