Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02980 ATGGCTTCCTCTTACCGTGACCGCACGTCGGAGTTCCGGTTACTGTCGGAGACTCTCAAGAAGATCGGAGGAGGGACCTCACCTTCGCTTCAACCCGAGACTGCTCCTTCCACCTCTCACGATTCCTATTCAAGATCCGAATTCAACCGGAAGGCCTCACGAATCGGGTTGGGGATCCACGAAACCTCGCAGAAGGTGGCGAGGCTCGCGCAGCTGGCGAGGAAATCGTCCATGTTCAACGATCCGGCTGTGGAGATTCAGGAGCTGACTGCGCTGATTAAGAACGAGATCACGGCACTGAATTCGGCTCTCTCCGATTTGCAAACCATTCAGAACATGGACATGGCTGACGGAAGTTACTCGCAGGATAGGATTGTGCATTCAACCGCGGTTTGTGATGACTTGAAGAGCAAACTCATGGGAGCCACGAAGCATCTGCAAGATGTCTTAACTGCTAGGACAGAGAATATCAAGGCTCACGAGAGCAGGAAGCAGATTTTTTCCAAGAATGCATCAAGGGAGAACCCTTTCCAGCATCAACCAAAGCCAGCTACTGAGCCGCCACCTTGGTCAAATTCATTGAATGCATATGAGAATCTGCAACAAGAATCGGCATTACCATCAAATGGAGCTCCTGTTAGCAATCAACTAAGACGAAGGTTGGCTGTGGACAACACTCCATCTCAGCAAATGGAAATGTCTATGGTGCAGCAAGTTGTTCCTCGGCAAGAAAACTATACTCAAAGTAGATCAACTGCTCTGCACAATGTGGAATCTACCATCACAGAACTTAGTGGGATTTTCTCGCATTTGGCTACAATGGTTGCTCATCAAGGGGAGCTTGCTATCAGGATTGATGATAACATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGTTCCTTATTGAGGCATCTCAACCGAATATCATCAAATAGGTGGCTTCTAATAAAGATATTTGCCGTTCTGATACTTTTCCTCCTGATCTTCATATTCTTTGTGGCGTAA 1011 0.4758 MASSYRDRTSEFRLLSETLKKIGGGTSPSLQPETAPSTSHDSYSRSEFNRKASRIGLGIHETSQKVARLAQLARKSSMFNDPAVEIQELTALIKNEITALNSALSDLQTIQNMDMADGSYSQDRIVHSTAVCDDLKSKLMGATKHLQDVLTARTENIKAHESRKQIFSKNASRENPFQHQPKPATEPPPWSNSLNAYENLQQESALPSNGAPVSNQLRRRLAVDNTPSQQMEMSMVQQVVPRQENYTQSRSTALHNVESTITELSGIFSHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLRHLNRISSNRWLLIKIFAVLILFLLIFIFFVA* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02980 336 ProSitePatterns Syntaxin / epimorphin family signature. 250 289 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phac8g02980 336 SMART tSNARE_6 239 306 IPR000727 -
Phac8g02980 336 MobiDBLite consensus disorder prediction 21 47 - -
Phac8g02980 336 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 244 306 IPR000727 -
Phac8g02980 336 PANTHER SYNTAXIN 46 331 IPR045242 -
Phac8g02980 336 CDD SNARE_syntaxin5 248 323 - -
Phac8g02980 336 Gene3D - 41 299 - -
Phac8g02980 336 MobiDBLite consensus disorder prediction 22 43 - -
Phac8g02980 336 Pfam SNARE domain 281 332 IPR000727 -
Phac8g02980 336 MobiDBLite consensus disorder prediction 160 194 - -
Phac8g02980 336 SUPERFAMILY t-snare proteins 44 299 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02980 Phac-Chr8 38649801 38655997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02980 1 336 SNARE and Associated Proteins AT5G05760 66.864 1.34e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02980 K08490 - gmx:100777383 551.977