Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02979 ATGGCTTCCTCTTACCGTGACCGCACGTCGGAGTTCCGGTTACTGTCGGAGACTCTCAAGAAGATCGGAGGAGGGACCTCACCTTCGCTTCAACCCGAGACTGCTCCTTCCACCTCTCACGATTCCTATTCAAGATCCGAATTCAACCGGAAGGCCTCACGAATCGGGTTGGGGATCCACGAAACCTCGCAGAAGGTGGCGAGGCTCGCGCAGCTGGCGAGGAAATCGTCCATGTTCAACGATCCGGCTGTGGAGATTCAGGAGCTGACTGCGCTGATTAAGAACGAGATCACGGCACTGAATTCGGCTCTCTCCGATTTGCAAACCATTCAGAACATGGACATGGCTGACGGAAGTTACTCGCAGGATAGGATTGTGCATTCAACCGCGGTTTGTGATGACTTGAAGAGCAAACTCATGGGAGCCACGAAGCATCTGCAAGATGTCTTAACTGCTAGGACAGAGAATATCAAGGCTCACGAGAGCAGGAAGCAGATTTTTTCCAAGAATGCATCAAGGGAGAACCCTTTCCAGCATCAACCAAAGCCAGCTACTGAGCCGCCACCTTGGTCAAATTCATTGAATGCATATGAGAATCTGCAACAAGAATCGGCATTACCATCAAATGGAGCTCCTGTTAGCAATCAACTAAGACGAAGGTTGGCTGTGGACAACACTCCATCTCAGCAAATGGAAATGTCTATGGTGCAGCAAGTTGTTCCTCGGCAAGAAAACTATACTCAAAGTAGATCAACTGCTCTGCACAATGTGGAATCTACCATCACAGAACTTAGTGGGATTTTCTCGCATTTGGCTACAATGGTTGCTCATCAAGGGGAGCTTGCTATCAGGTTTCCTCCTTTAACTTAA 870 0.4897 MASSYRDRTSEFRLLSETLKKIGGGTSPSLQPETAPSTSHDSYSRSEFNRKASRIGLGIHETSQKVARLAQLARKSSMFNDPAVEIQELTALIKNEITALNSALSDLQTIQNMDMADGSYSQDRIVHSTAVCDDLKSKLMGATKHLQDVLTARTENIKAHESRKQIFSKNASRENPFQHQPKPATEPPPWSNSLNAYENLQQESALPSNGAPVSNQLRRRLAVDNTPSQQMEMSMVQQVVPRQENYTQSRSTALHNVESTITELSGIFSHLATMVAHQGELAIRFPPLT* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02979 289 MobiDBLite consensus disorder prediction 21 47 - -
Phac8g02979 289 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 244 289 IPR000727 -
Phac8g02979 289 Gene3D - 41 284 - -
Phac8g02979 289 MobiDBLite consensus disorder prediction 22 43 - -
Phac8g02979 289 PANTHER SYNTAXIN 46 283 IPR045242 -
Phac8g02979 289 MobiDBLite consensus disorder prediction 160 194 - -
Phac8g02979 289 SUPERFAMILY t-snare proteins 44 281 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02979 Phac-Chr8 38649801 38655997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02979 1 285 SNARE and Associated Proteins AT5G05760 64.460 7.54e-119 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02979 K08490 - gmx:100777383 489.96