Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02961 ATGGCTGTGTCCAACGGCGTCGAAGCAGTGTTAGAGTTTCTGCGGAAGAATGGCTTGTCGGAAGCGGAGTCCGCGCTCCGAGAAGACATCATCGAGAGCACCGACCTCGGAAACTTCGACTACGAGAAGTTCTTCTTCCCCATGGTCCCGCCGCCGCCGCCGGTCAAAGTCCGATCCTTCTCCCGACCGTCCGAGCTCGCCGCCGCGGACGGCGACTGCTCCAAATCCAGCTCCGACGAGTTCATCACCATCGGGTCTTCCACTTCTCGCGTCTCTTCTTTAGAATTCGTAAATCCGTATGGAATCCGTTCCTCGTCTCAGACTCAGAATGATTCCGAGTCTTCTTCTGAAAGATTATCTCAGTTTGGCACAGCACGTGATTATCACGATTTTGATATGCAAAATGAACCGTATTGGTATAATGAAAAAGATGATGACTATTTCATGACTCCTAGTTTTGAGGGGCCAGATTATTTTGCGTGTCAGAGTGAGGATAAGTTTGTCATGACAGCAGAAACAGAAAACCAACGTGACAATTCTCTGCATCTTGGTTACAACTTTGAAGAATTTCAACTAAAGGGGAATAGTAATGGTGGTTACATGGACAAGGCATGCCTCGATAATCATTCCTCTGTAGGGGATGGAACTGTGACTTGTTCAAAAGGGTATTGTCATGTTGATAACAAGGACCAGTTTGAAGAGGAATTAGAGGGTAAGGCTGAGAAACCCAGTGTCTCCTGCAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCTGGTTCTGGAGGTTCTTGCAGTCTGGATCCTACAAACTTCGGCTACCCTAACTTGAAGGAAATCCATCTGAACAATTTTCATTTGAAGGTTGTTGGGGACATTAACTCTCTCGATTCTACTTCAGAGCTAACTCTGAATCAAAGTTTTGACCACTACACTAAAAACGACTGCAGTAAGAAGTACGAGGGTCCTTACGACTTTACTATTGAAGTTACTGATAAAAATCTACCAAATGGACTTGACACCTCTGAAGCACAAGTTGGTGGAGAATTAGCTGAAGACTGCCAAGATCCAGAGCTTGCTGCGGATGGAGAGGATACCACTGATGATGAGCTCTTAAAGTATACTCAAGAGGAAGAATACGAAGTGTTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTTCCGATTGTGCTAAATACAGTCTTGGCTGGAAGGTATTATGTAACAGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGTTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGGGTGACCCAGCAGATGAACATCACATTTTGCGCCTTTATGACTATTTCTACCATCAGGAGCACTTGTTCATTGTAACTGAACTTCTGCGAGCAAACTTGTATGAATTTCAGAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTAAAGAGATTGCAGATCATTACTCGTCAGTGTTTGGAAGCATTGCAATACTTGCATAGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAGATGTGAGATAAAGGTTATTGATCTTGGAAGTAGTTGCTTCCAAACAGACAATCTCTGCCTATATGTACAATCCAGATCCTATAGAGCTCCTGAAGTGATGTTAGGTCTTCAATATGATGAAAAGATTGATATATGGTCTCTCGGATGCATCCTGGCTGAGCTATGCTCTGGTGAAGTGCTGTTCCCAAATGATGCAGTTGTGATGATCCTGGCACGCATAATTGGAATGTTTGGTTCTATTGATATGGAAATGTTGGTGAAAGGACAAGATACGCACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGACTGATGAACTGGAGTTCTTGATTCCAGAAGAGTCATCGTTGGAGCAGCACCTACAGGTTACTGATACTATGTTTATCAACTTTATCAGATACCTACTCTGCATCAACCCCAAAAGAAGGCCTACTGCAAGACATGCACTAAAGCATCCATGGCTTTCCTATGTTTACTAA 2160 0.4231 MAVSNGVEAVLEFLRKNGLSEAESALREDIIESTDLGNFDYEKFFFPMVPPPPPVKVRSFSRPSELAAADGDCSKSSSDEFITIGSSTSRVSSLEFVNPYGIRSSSQTQNDSESSSERLSQFGTARDYHDFDMQNEPYWYNEKDDDYFMTPSFEGPDYFACQSEDKFVMTAETENQRDNSLHLGYNFEEFQLKGNSNGGYMDKACLDNHSSVGDGTVTCSKGYCHVDNKDQFEEELEGKAEKPSVSCSCEVPFCKSSPGSGGSCSLDPTNFGYPNLKEIHLNNFHLKVVGDINSLDSTSELTLNQSFDHYTKNDCSKKYEGPYDFTIEVTDKNLPNGLDTSEAQVGGELAEDCQDPELAADGEDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKGDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLKRLQIITRQCLEALQYLHSLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARIIGMFGSIDMEMLVKGQDTHKYFTKEYDIYYVNEETDELEFLIPEESSLEQHLQVTDTMFINFIRYLLCINPKRRPTARHALKHPWLSYVY* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02961 719 Pfam Protein kinase domain 415 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02961 719 Gene3D Transferase(Phosphotransferase) domain 1 467 715 - -
Phac8g02961 719 Gene3D Phosphorylase Kinase; domain 1 408 494 - -
Phac8g02961 719 CDD PKc_DYRK_like 413 715 - -
Phac8g02961 719 FunFam Putative serine/threonine-protein kinase dyrk2 407 494 - -
Phac8g02961 719 PANTHER DUAL SPECIFICITY PROTEIN KINASE 107 715 - -
Phac8g02961 719 SMART serkin_6 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02961 719 SUPERFAMILY Protein kinase-like (PK-like) 402 716 IPR011009 -
Phac8g02961 719 MobiDBLite consensus disorder prediction 102 121 - -
Phac8g02961 719 ProSiteProfiles Protein kinase domain profile. 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02961 719 FunFam Serine/threonine-protein kinase ppk15 492 716 - -
Phac8g02961 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02961 Phac-Chr8 38491047 38496205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02961 410 710 MAP Kinase Gene Family AT5G19010 31.153 8.39e-33 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Phac8g02961 Pkinase 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02961 - - gmx:100783988 1267.29