Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02943 ATGAAGGACGGTGGCGACGATCGCGTGAAGGGCTCGTGGAGTCCTCAGGAGGACGCGACGCTAATGAAATTGGTGAACGAGCACGGCCCGCGGAACTGGTCCGCGATCAGCAGCGGCATTCCGGGGCGCTCCGGCAAGTCCTGCCGGTTGCGATGGTGCAACCAGCTCAGCCCGGACGTGAAGCATCGCCCCTTCAGTCCGATGGAGGACGAGATCATCATCAAGGCTCATGCTGTTCACGGGAATAAGTGGGCCACCATCTCGCGCCTCCTCTCTGGCCGCACCGACAACGCCATTAAGAACCACTGGAACTCCACCCTCCGCCGCCGTGGCACGACGGAGCACTCCTCCTCCTCGTCGGCATCGCCAAGCACCAAGCGGCCCTCTCCGTTGGAGTTATGCTATCCTCTGAAGAAACAGCGTGTGGAGAAGGAAAGCGAGGAAGAGTGCATGGCGATTCCCCTTATGAAGCCGTTGAGTCTTTTTCCGTCTGGGGAAAAATCGGAGGGAGAAACGATGGAAGAGGAAGAAAAGGAGGAAGAAAGAGAAGGAGAAGAGTTTGAAGTGAATAATATTAACACGGCTTCGGATCAAGATTACTTCCTGCAGATGATGCGTCAGATGATAGCTGACGAGGTTCGGAATTATGTTGATAGTTTGCGTCATCAAAGGCAACATGAAATCATTCATCCTGGGTTAAAGTTTCATCCCAAATAA 717 0.5425 MKDGGDDRVKGSWSPQEDATLMKLVNEHGPRNWSAISSGIPGRSGKSCRLRWCNQLSPDVKHRPFSPMEDEIIIKAHAVHGNKWATISRLLSGRTDNAIKNHWNSTLRRRGTTEHSSSSSASPSTKRPSPLELCYPLKKQRVEKESEEECMAIPLMKPLSLFPSGEKSEGETMEEEEKEEEREGEEFEVNNINTASDQDYFLQMMRQMIADEVRNYVDSLRHQRQHEIIHPGLKFHPK* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02943 238 Gene3D - 63 130 - -
Phac8g02943 238 Pfam Myb-like DNA-binding domain 64 106 IPR001005 -
Phac8g02943 238 Pfam Myb-like DNA-binding domain 10 56 IPR001005 -
Phac8g02943 238 PANTHER MYB PROTEIN-RELATED 10 125 - -
Phac8g02943 238 ProSiteProfiles Myb-like domain profile. 5 56 IPR001005 -
Phac8g02943 238 MobiDBLite consensus disorder prediction 170 186 - -
Phac8g02943 238 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Phac8g02943 238 CDD SANT 64 107 IPR001005 -
Phac8g02943 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Phac8g02943 238 SUPERFAMILY Homeodomain-like 8 103 IPR009057 -
Phac8g02943 238 FunFam MYB transcription factor 10 61 - -
Phac8g02943 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 60 IPR017930 -
Phac8g02943 238 MobiDBLite consensus disorder prediction 161 186 - -
Phac8g02943 238 Gene3D - 9 61 - -
Phac8g02943 238 SMART sant 9 58 IPR001005 -
Phac8g02943 238 SMART sant 61 109 IPR001005 -
Phac8g02943 238 FunFam Transcription factor MYB44 64 110 - -
Phac8g02943 238 MobiDBLite consensus disorder prediction 102 127 - -
Phac8g02943 238 CDD SANT 12 54 IPR001005 -
Phac8g02943 238 MobiDBLite consensus disorder prediction 102 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02943 Phac-Chr8 38293996 38294896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02943 7 117 MYB Transcription Factor Family AT4G37260 72.973 1.02e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g02943 Myb_DNA-binding 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02943 - - vra:106763298 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02943 8 38293996 38294896 Phac8g02943 8 38293996 38294896 ECH