Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02941 ATGTCGATTCGCGATTCCCAAGCCTTCAATTGGCACTATGACGAGCTCGACGACCAGAACCTCGAAATCCGCGGCCGCAAGCTCTTCTTCATCATCGTCCTTTTTTCCATCGTCCTCCTTTTCACCGCGCTCTTCATCTTCGCGCGCCGGATCTGCCACCAGCACGGCCTCCTCTTCGACGCCGTCCCGTCTCACCACGCGCCGCCGGTGCTTCCTTCTCAGGACGGCCTCGACGCCGCCGCGATCAAGCGGATACCGATCATCCTTCACCAGCGCGCGGCGGCGGAGGAGACGGAGTGCAGCATCTGCCTCGGCGCGTTCGTCGACGGTGCGAAGCTGAAGGTTCTCCCTGGATGCGAGCACAGGTTCCACAGCGAGTGCGTGGACAAGTGGCTCGTGAATCACTCCAATTGCCCTCTCTGCAGAGCTTCGGTGAAACTCGATCCTTCATTTCCGAGGATTTTGATCCAAGCGCCACCCGTTAGAACCGCTCTTCCTCTCTGA 504 0.5972 MSIRDSQAFNWHYDELDDQNLEIRGRKLFFIIVLFSIVLLFTALFIFARRICHQHGLLFDAVPSHHAPPVLPSQDGLDAAAIKRIPIILHQRAAAEETECSICLGAFVDGAKLKVLPGCEHRFHSECVDKWLVNHSNCPLCRASVKLDPSFPRILIQAPPVRTALPL* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02941 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 147 IPR013083 -
Phac8g02941 167 SMART ring_2 100 141 IPR001841 -
Phac8g02941 167 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 29 148 - -
Phac8g02941 167 Pfam Ring finger domain 99 142 IPR001841 -
Phac8g02941 167 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Phac8g02941 167 SUPERFAMILY RING/U-box 86 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02941 Phac-Chr8 38282384 38283357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02941 6 150 C3H Transcription Factor Family AT3G11110 43.709 2.19e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02941 - - gmx:100794554 259.225