Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02938 ATGAAGGGTTACGAGCCACGTTCAAGTTCCTCTTGTGCAGCCTGCAAGTTCTTGAAGAGACGATGCATACCAAATTGTATATTTGCACCTTACTTTCGCTCTGACGAGTGCAAGAAATTTGCCAAGGTGCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTCATTGAAGTTCCTGAGGAGCAGAGAGAGGACACGGTGAATTCTCTTGCTTATGAAGCAGAAGCCAGGCTCAGGGACCCCATTTATGGATGTATTGGTGCCATAGCTCTTCTACAGAGGAAGATGGTGGAGCTTCAACACGACCTTGCCATTGCTAAGGACCGTCTTGCTCGTTATGCTGCTGCTGCCACCACGCCTTCCACCACTACCACCACCACCACCACCAATACCTTCAATTCCCATGTTAGTTTGCCACCCTTCCCTGAATTTTTCTCTTGCACCGATTTCAACGACAACTTCTTCCACAACTCTTCCTCTCAATCTCCGCCATTGACCAGACATGAAATGGTCGATGATTTCATTCCAATCCCTTATATATTATGA 549 0.4718 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPIYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAATTPSTTTTTTTTNTFNSHVSLPPFPEFFSCTDFNDNFFHNSSSQSPPLTRHEMVDDFIPIPYIL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02938 182 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Phac8g02938 182 Coils Coil 90 117 - -
Phac8g02938 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 127 - -
Phac8g02938 182 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02938 Phac-Chr8 38227961 38229065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02938 1 116 AS2 family AT3G11090 75.862 6.51e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac8g02938 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02938 - - gmx:100777635 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02938 8 38227961 38229065 Phac8g02938 8 38227961 38229065 ECH