Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02927 ATGGGTGGAAATCCCCCTTGTGGGTCATGCAAATTGCTGAGACGCAAGTGCACAGAAGATTGCATCTTCGCTCCTTATTTTCTTGCTGATGAACCTCAAAAGTTTGCCGTAGTTCATAAGGTTTTTGGTGCTAGCAATGTTAGCAAAATGTTGCAGGAACTTCCAGTTGAGCAGAGAGCAGATGCAGTGAGTAGTCTAGTGTATGAGGCAAGTGCTAGAGTGAGGGATCCTGTGTATGGTTGTGTTGGAGCCATATCTTATTTGCAGAATCAAGTTGCTGATCTTAAAATGCAGCTTGCAGTTGCTCAAGCAGAGATACAATGCATTCAGATAGATAAGAAGTCACTGATTGTACCATCAGAAGAAACTGATCTACACAACTCTGATCATCTTCAAAATAATTTCTCTCAGTTTCCTGATTTTGGTACTTCTAATAGTGTAGTTCATCATCCCCCTAATTATCTTAGACAATAA 474 0.4051 MGGNPPCGSCKLLRRKCTEDCIFAPYFLADEPQKFAVVHKVFGASNVSKMLQELPVEQRADAVSSLVYEASARVRDPVYGCVGAISYLQNQVADLKMQLAVAQAEIQCIQIDKKSLIVPSEETDLHNSDHLQNNFSQFPDFGTSNSVVHHPPNYLRQ* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02927 157 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Phac8g02927 157 Coils Coil 85 112 - -
Phac8g02927 157 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Phac8g02927 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02927 Phac-Chr8 38130089 38130811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02927 3 130 AS2 family AT2G30130 71.094 3.90e-63 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac8g02927 LOB 2.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02927 - - lang:109360574 220.705