Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02917 ATGACTACTGCAGCCAAGAAGTACTTCTTCAAAATCTTCTTTCCAGAGAAACACTCTGAAAGAATGGTTATTCCAAGTTCTTTTGTGAAGTCTAGACGCTTACGAAGAAGGAGAATCCCTGAAGATATCATCCTCAGAAATGTTAGTGGAGGGGTTTGGTGTGTCAAAACTCGTCTCGTTGGACACAAAATCTACTTTCAAGAGGGTTGGAAGGTTTTTCAAGCAGAAAACTGTATAGGAAAAGCAGATTTTCTACTTTTTAAGTATGATGGGACCAATGTATTCAAGGTGGTAATTCTTGAACAATCATCACGCTGTGAAAGGAGAGAAGTTGAAGAAGATGAGGTGATAGATATTACCGAAGAGGAAGAGAATGAAAAAACTGAGGACTATGTGATGGAGGACGAGGAAGATAGTGATTATGAGAATGAGTATTATGAGGATGAAGATGACAATTATACAGAAATGGAAGAAGAGAGTGAAGAAGAACACACGAAGAGTCAAAATCATCATAGTAGAGCTAGCAATACAGGTCCTCATCTTGAAGACTATGAATTTGATCCACAAATGTATATTCAGCCTGAAAATCCATACTTTGAAGCAAAACTATATAAAAATAGACCCAACGAATTGCATATTCCAGCAAATGTCTTGAGAGAGTCGTCGCTTACTTTTCCAGAAGAGATCACCCTTTCACGTTGCAAATGCTTCCAACGTGAGGATTTTCAAAGAAACGAATTAGGAGACAATCATTTGGGCTTTTCACGACAGACACAAATGTATTCAGAAGTAACAAAAGTGTCTGAGTGGCAAGATGGTCGAGTATGTATTAAAGGATGGACAAACTTCTGTACAAAGAACAAGATCAAAGAAAATGATGTATGCATCTGTGAAATTGTATCAGGGAAACACCAAATAGTAAGAACACTTCAGGTGCACGTGCTTGGTGCTAGGAACGAATGA 963 0.3811 MTTAAKKYFFKIFFPEKHSERMVIPSSFVKSRRLRRRRIPEDIILRNVSGGVWCVKTRLVGHKIYFQEGWKVFQAENCIGKADFLLFKYDGTNVFKVVILEQSSRCERREVEEDEVIDITEEEENEKTEDYVMEDEEDSDYENEYYEDEDDNYTEMEEESEEEHTKSQNHHSRASNTGPHLEDYEFDPQMYIQPENPYFEAKLYKNRPNELHIPANVLRESSLTFPEEITLSRCKCFQREDFQRNELGDNHLGFSRQTQMYSEVTKVSEWQDGRVCIKGWTNFCTKNKIKENDVCICEIVSGKHQIVRTLQVHVLGARNE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02917 320 SMART B3_2 9 103 IPR003340 GO:0003677
Phac8g02917 320 Gene3D - 185 318 IPR015300 -
Phac8g02917 320 PANTHER B3 DOMAIN-CONTAINING 5 303 - -
Phac8g02917 320 Gene3D - 1 106 IPR015300 -
Phac8g02917 320 CDD B3_DNA 7 100 IPR003340 GO:0003677
Phac8g02917 320 ProSiteProfiles B3 DNA-binding domain profile. 7 103 IPR003340 GO:0003677
Phac8g02917 320 MobiDBLite consensus disorder prediction 111 183 - -
Phac8g02917 320 SUPERFAMILY DNA-binding pseudobarrel domain 192 313 IPR015300 -
Phac8g02917 320 MobiDBLite consensus disorder prediction 114 158 - -
Phac8g02917 320 Pfam B3 DNA binding domain 9 99 IPR003340 GO:0003677
Phac8g02917 320 MobiDBLite consensus disorder prediction 159 180 - -
Phac8g02917 320 SUPERFAMILY DNA-binding pseudobarrel domain 6 102 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02917 Phac-Chr8 38019004 38020776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02917 9 317 B3 DNA Binding Superfamily AT5G60140 24.269 9.63e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac8g02917 B3 4.7e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02917 - - gmx:100810634 363.614