Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02856 ATGCGCCGAGGGAGAGCCACCGCCGCTGTCGCCGCCGTCCATCCCTCGGCGGACCACCACCCTCCGCCCAAGGAGACGCGCTTCCGTGGAGTCAGGAAGCGCCCCTGGGGGCGATTCGCCGCGGAGATTAGAGATCCGTGGAAAAAACAGCGCGTCTGGCTCGGCACCTTCGATTCCGCCGAGGATGCCGCGCGGGCCTACGACGCCGCCGCCCGATCCTTCCGCGGGCCCAAAGCGAAGACCAATTTTCCTTTCCCCAACCCCGAGACAGACCACTCGCACTCGCAGATTCCGCTATACCAGGCCCACGGGCTCTCCAAGTTCGACCCGGTCCAGGTGAACCGGCCCACCACCAGCGGCATGAGCAGCACGGTCGAGTCCTTCAGCGGGCCTAGGGTTCCTTCCTCCTCCACTCTCCACCCTCGCAAGCCCATCGTTAACCCTGTTGTTATCCCTCCTCTCGACGATTGCCACAGCGATTGCGACTCTTCTTCCTCCGTCGTCGAGGACGAGGACTGCGTCCTCACCTCCTCGTTCCGGCAACCGCTCCCCTTTGATCTCAACCTCCCGCCGCCCGGCGCCGACGATGACATCCCGGCCACCGTGCTCTGCCTCTGA 618 0.6537 MRRGRATAAVAAVHPSADHHPPPKETRFRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAYDAAARSFRGPKAKTNFPFPNPETDHSHSQIPLYQAHGLSKFDPVQVNRPTTSGMSSTVESFSGPRVPSSSTLHPRKPIVNPVVIPPLDDCHSDCDSSSSVVEDEDCVLTSSFRQPLPFDLNLPPPGADDDIPATVLCL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02856 205 CDD AP2 26 84 IPR001471 GO:0003700|GO:0006355
Phac8g02856 205 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Phac8g02856 205 FunFam Ethylene-responsive transcription factor 2 26 85 - -
Phac8g02856 205 Pfam AP2 domain 26 76 IPR001471 GO:0003700|GO:0006355
Phac8g02856 205 SUPERFAMILY DNA-binding domain 27 85 IPR016177 GO:0003677
Phac8g02856 205 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 173 - -
Phac8g02856 205 MobiDBLite consensus disorder prediction 117 141 - -
Phac8g02856 205 MobiDBLite consensus disorder prediction 1 32 - -
Phac8g02856 205 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Phac8g02856 205 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Phac8g02856 205 MobiDBLite consensus disorder prediction 18 32 - -
Phac8g02856 205 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Phac8g02856 205 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02856 Phac-Chr8 37485403 37488195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02856 1 196 AP2-EREBP Transcription Factor Family AT1G50640 47.511 3.82e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac8g02856 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02856 K09286 - gmx:100795557 259.61