Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02853 ATGTGTGGTTATGGGAGTAACTGTCGCTACCATCACCCTGCTCATATTTCAATTGGTACTCATTATGGTGAAGAACTCCCTCAGAGGACCGGGCAACCTGATTGTGAGTATTTTCTTAAGACAGGGACATGCAAGTATGGATCAACATGTAAATACCACCATCCAAAGGACAGGCGTGGTGCTGCTCCTGTGTCATTCAATACTTTAGGTCTTCCAATGCGTCAGGAAGAAAAATCATGTCCCTATTACATGAGAACCGGGTCTTGTAAGTTTGGTGTTGCATGCAAGTTTCACCATCCACAGCATGCTTCCCTTGGAGCATATCCCTTGGCTGGTTCTCCTACCTCAACAATTATCCCTACATCAGGTTTGCCATATGCTGGAGGGTTTCCTGCATGGTCAGCAGTACCTAGAATGTCATATTTATCTGGGCAAGGTGTTCAATCTTATGTGCCTCCTTTTCTGTCTTCTTCACAAAGCATTATACCCATGCAGAGCTGGAACAACTACATGGGAAGTATGAACCCAACGATGCCTACTGGTTATCTTGGATCTAATCTTGTTTATGACTTCATGAATCTGGGGGAGTCACTTTTCGGTGGGCAGGCCATAAATTCAGCTCTCCCAAATCGACCTGATCAACCAGAATGTAGATACTTTATGAGCACTGGGACCTGCAAATATGGATCTGATTGCAAGTTCCACCATCCAAAAGAAAGAATATCTCAATCATTAATAAATCCACTTGGCCTTCCTGTGAGACCTGGGCAAGCTGTATGCTCTTATTACAGAATCTATGGAATGTGCAAATTTGGTCCAACATGCAAATTTGATCATCCAGTATTGACTATCCCTCAGAACTATGGCTTGACCTCACCTGCTCTATCTGCACTTGATGCTCCTCTCATTAGTAACCAAAGAGGGTTGTCAAGTGTACAATCACCTGAGACATCTCCTTCTAAATTATCAAGTGACAACAAGCTTCAGCACTCTGATGCAAAAGCTGGCACAGAAGATTCATCCAAACAAGCTGATACTACACCAAATTCCTTCCCAGCCTCCTCGGAGCCTTTACATGACTAA 1083 0.4367 MCGYGSNCRYHHPAHISIGTHYGEELPQRTGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVSFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQHASLGAYPLAGSPTSTIIPTSGLPYAGGFPAWSAVPRMSYLSGQGVQSYVPPFLSSSQSIIPMQSWNNYMGSMNPTMPTGYLGSNLVYDFMNLGESLFGGQAINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERISQSLINPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPALSALDAPLISNQRGLSSVQSPETSPSKLSSDNKLQHSDAKAGTEDSSKQADTTPNSFPASSEPLHD* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02853 360 MobiDBLite consensus disorder prediction 307 326 - -
Phac8g02853 360 MobiDBLite consensus disorder prediction 307 360 - -
Phac8g02853 360 MobiDBLite consensus disorder prediction 340 354 - -
Phac8g02853 360 ProSiteProfiles Zinc finger C3H1-type profile. 1 15 IPR000571 GO:0046872
Phac8g02853 360 Gene3D - 1 61 - -
Phac8g02853 360 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 78 101 IPR000571 GO:0046872
Phac8g02853 360 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 256 280 IPR000571 GO:0046872
Phac8g02853 360 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 213 238 IPR000571 GO:0046872
Phac8g02853 360 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 31 56 IPR000571 GO:0046872
Phac8g02853 360 Gene3D - 62 108 - -
Phac8g02853 360 ProSiteProfiles Zinc finger C3H1-type profile. 29 57 IPR000571 GO:0046872
Phac8g02853 360 ProSiteProfiles Zinc finger C3H1-type profile. 74 102 IPR000571 GO:0046872
Phac8g02853 360 SUPERFAMILY CCCH zinc finger 215 240 IPR036855 GO:0046872
Phac8g02853 360 SUPERFAMILY CCCH zinc finger 33 58 IPR036855 GO:0046872
Phac8g02853 360 SUPERFAMILY CCCH zinc finger 252 280 IPR036855 GO:0046872
Phac8g02853 360 ProSiteProfiles Zinc finger C3H1-type profile. 211 239 IPR000571 GO:0046872
Phac8g02853 360 ProSiteProfiles Zinc finger C3H1-type profile. 254 282 IPR000571 GO:0046872
Phac8g02853 360 SMART c3hfinal6 211 238 IPR000571 GO:0046872
Phac8g02853 360 SMART c3hfinal6 29 56 IPR000571 GO:0046872
Phac8g02853 360 SMART c3hfinal6 76 101 IPR000571 GO:0046872
Phac8g02853 360 SMART c3hfinal6 254 281 IPR000571 GO:0046872
Phac8g02853 360 Gene3D - 205 282 - -
Phac8g02853 360 PANTHER PROTEIN PHOSPHATASE RELATED 1 315 - -
Phac8g02853 360 SUPERFAMILY CCCH zinc finger 73 102 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02853 Phac-Chr8 37473343 37478687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02853 1 342 C3H Transcription Factor Family AT1G04990 49.143 3.26e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac8g02853 zf-CCCH 3.5e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02853 - - vra:106765262 751.895