Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02834 ATGGTCTTCACTAAGCTTTCATTAGTTATATGTTCACTCTTAGGTCTCCATTTCTCCCCACTTTTCACCATTTTTTCTTTTGCTGCAACCACTGAAGAAAACCAAGTGAGGGAAGCAGGTGCTTTACTTGAGTGGAAAGCTAGCCTTGAAAACCAAAGCCAAGCTTCTCTGTCTTCATGGAGAAGAGGTGTGAGTCATTGCAAGTGGAAAGAAATCATTTGTGACAAATCCAACTCTGTCTCCACTATAAATGTAGCAAATCATGGCCTAAAAGGTACTCTTCACACTCTCAACTTCTCATCCTTTCCAAACCTGCTAACTCTGGATGTTAGTAACAACAGTTTCAGTGATACTATTCCACACCAAATTGGTAACTTGTCCAGAGTTTCTCAGTTGATAATGAATAATAACAATTTTAGTGGTCCAATCCCCATCTCCTTGATGAAGTTGGCTACCTTGAAGATTCTAAACTTCAAACATAATAGCCTTTCTGGCCCTCTTCCTGAGGAGATTGCAGAATTGAGGAACTTAGAGCGTCTGTTATTTGAATCAAATCACCTTTCTGGTACCATTCCTCCAACAATTGGAAGGATGGCCAATCTTGTTGAACTTAATTTGCAACTTAACTCTATCAATGGTACAATCCACCCTTCAATTGGGAACTTGACAAATTTAAAATTCCTCAGGCTTCAACAAAATAGTCTCTCTGGCTCCATTCCTTACTTCTTAGGAGACATGACCAATTTGCTTGTTCTTGAAATCGATCAAAATAGATTAACAGGACCAATTCCTCCCCATATTGGAAACTTGACAAAGATGGTTAATCTGTCCTTGGCCGCTAACATGCTTTCTGGACCAATTCCTCCTTCCCTTGGAAACTTGGTCAATCTAATGGCCTTAGAACTTTCCAGGAACAATCTTTCCGGAGTTATTCCTTCCACCTTGGGAAATTTGACAAACCCCATCTTTTTCGTTGTGTCATTAAACAAACTTGAAGGCAGATTACCACCAGGAATGAATAACTTCACCAATTTAAAGAACTTACAACTAAGTGAAAATAGTTTCTCTGGCCCTCTGCCACAACAAATTTGCCTTGGAGGGTCTCTAATGTTTTTCACTGCTGAAGATAATCATTTCACGGGACCAGTTCCAAAAAGCCTGAAAAATTGCTCCACTATTCTTAGACTCAGACTAGATGGAAACCAGTTGAGTGGAAACATATCAGATGAATTTGGTGTTTATCCATTGTTGAAATACATTGATCTGAGTAGGAATAATTTTTATGGCGGCATTTCCCCAAATTGGGCAAAGTGTCCTAATCTTTCAAGCCTTATAATGGCCAACAACAACTTATCTGGTAGCATACCACCAGAACTCAGCCAGGCACCCGTGTTAGCAGAACTTGTCTTGTCTACAAATCATTTAACAGGGAAGATTCCAAAAGAACTCGGGAAGTTGACCTCTTTGTTGAAGTTATCAGTAAGCAACAATGAACTTTCCGGCACCATTCCTACAGAAATAGGTGCTTTGTCCAGCCTTGACACTTTGGAGCTTTCAGCAAATAATTTAGTTGGTGCAATTCCAAAACAGTTGGGAGAGTTATTCAAGTTGCTTCACTTGAACTTGAGCAACAACAGATTGACAGAAAGCATTCCCTTGGAATTTGGCCGTTTGCAATCTCTTCAAAGTCTTGATCTCAGTGTCAATTTGTTAAATGGAGAAATACCATCTGCACTTGCAAGTATGCAAAGATTGGAAACGCTAAATCTCTCTCACAACAATCTCTCTGGAGCCATTCCATCTAATTTCAAGGATGGCTTGACAAAGGTTGACATATCTAGTAACCAATTGGAGGGTCCAATTCCCAACACTCGAGCCTTTCTCAATGCATCATTTGATGCATTGAAAGATAATAAAGGCTTGTGTGGAAATGTCTCCGGTTTGGTGCCTTGTAGCAGTCGTAATGGTAAAGTGAAAATAAATGTCACCATGTTGGCATTAGTCCTTACTTTTGGTGCTCTGCTTCTAGTAGCACTCGTGGTTGGAGTTTTGTTATGTATTCGGTACAGAAGAGCAACAGAAAGCAAAAAGGAGGATGCTAAAGAAGAAAAAACTCAGGAGCATTATGCCATATGGAGTTATGATGGAAAATTAGTGTATGAAAATATCATTGAAGCCACAGAGGAGTTTGATGACAAATATCTCATTGGAGAAGGAGGGTCTGCATCTGTTTATAAGGCTAAATTACCCACAGGACAGATTGTTGCTGTGAAAAAGCTTAAAGATGCACCCAATGAAGACACACCGGATTTAAGAGCTTTTATGACTGAGGTTAAAGCCTTGGGAGAAATCAAGCATCGTAACATAGTGAAGTCATTAGGATATTGTTTACATCCACGTTACTCCTTTTTGGTTTATGAGTTCCTAGAGGGGGGTAGTTTGGATAAAGTACTCATCGATGATACACGTGCAACAATGTTTGATTGGAACACGAGGGTAAAGGTTGTTAAAGGTGTGGCAAATGCTTTGTATCATATGCATCATGGTTGCTTTCCTCCTATTATTCATCGAGACATATCAAGCAAGAATATTCTTATAGATTCGGAATACGTAGCCCGTATTTCTGACTTCGGAACAGCCAAAATTCTGAATCCTGATTCACGCAATTTAACCGCGTTTGCAGGCACATGTGGGTATTCTGCACCAGAGCTTGCTTATACTATGGAAGTGAATGAAAAATGTGATGTGTTCAGTTTTGGAGTGCTTTGTTTGGAAATAATGATGGGAAATCATCCAGGAGATCTCATTTCATCGTTATTTTCACCCTCTGAAACATCATCAGCGTACAATTTGCTGTTGAAGGATGTGTTGGACCAAAGACTACCTCTTCCAGTGAAGCCAGTTGTTGAGGAGGTGATCTTGATCGCCAAAATAACATTTGCTTGCTTAAGTGAAACTCCACGTTTTCGTCCAAGCATGGAGCAAGTGCATAACCATTTTCTGATGCCAGAACCATCTTCACTCAATTCACTCTCCATCATCACACTTGCACAACTTGTCGATAATTGA 3069 0.3985 MVFTKLSLVICSLLGLHFSPLFTIFSFAATTEENQVREAGALLEWKASLENQSQASLSSWRRGVSHCKWKEIICDKSNSVSTINVANHGLKGTLHTLNFSSFPNLLTLDVSNNSFSDTIPHQIGNLSRVSQLIMNNNNFSGPIPISLMKLATLKILNFKHNSLSGPLPEEIAELRNLERLLFESNHLSGTIPPTIGRMANLVELNLQLNSINGTIHPSIGNLTNLKFLRLQQNSLSGSIPYFLGDMTNLLVLEIDQNRLTGPIPPHIGNLTKMVNLSLAANMLSGPIPPSLGNLVNLMALELSRNNLSGVIPSTLGNLTNPIFFVVSLNKLEGRLPPGMNNFTNLKNLQLSENSFSGPLPQQICLGGSLMFFTAEDNHFTGPVPKSLKNCSTILRLRLDGNQLSGNISDEFGVYPLLKYIDLSRNNFYGGISPNWAKCPNLSSLIMANNNLSGSIPPELSQAPVLAELVLSTNHLTGKIPKELGKLTSLLKLSVSNNELSGTIPTEIGALSSLDTLELSANNLVGAIPKQLGELFKLLHLNLSNNRLTESIPLEFGRLQSLQSLDLSVNLLNGEIPSALASMQRLETLNLSHNNLSGAIPSNFKDGLTKVDISSNQLEGPIPNTRAFLNASFDALKDNKGLCGNVSGLVPCSSRNGKVKINVTMLALVLTFGALLLVALVVGVLLCIRYRRATESKKEDAKEEKTQEHYAIWSYDGKLVYENIIEATEEFDDKYLIGEGGSASVYKAKLPTGQIVAVKKLKDAPNEDTPDLRAFMTEVKALGEIKHRNIVKSLGYCLHPRYSFLVYEFLEGGSLDKVLIDDTRATMFDWNTRVKVVKGVANALYHMHHGCFPPIIHRDISSKNILIDSEYVARISDFGTAKILNPDSRNLTAFAGTCGYSAPELAYTMEVNEKCDVFSFGVLCLEIMMGNHPGDLISSLFSPSETSSAYNLLLKDVLDQRLPLPVKPVVEEVILIAKITFACLSETPRFRPSMEQVHNHFLMPEPSSLNSLSIITLAQLVDN* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02834 1022 FunFam Leucine-rich repeat receptor protein kinase MSP1 692 808 - -
Phac8g02834 1022 Pfam Leucine Rich Repeat 584 604 IPR001611 GO:0005515
Phac8g02834 1022 ProSitePatterns Protein kinases ATP-binding region signature. 736 759 IPR017441 GO:0005524
Phac8g02834 1022 FunFam Leucine-rich receptor-like protein kinase family protein 192 289 - -
Phac8g02834 1022 ProSiteProfiles Protein kinase domain profile. 730 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02834 1022 SUPERFAMILY Protein kinase-like (PK-like) 712 1000 IPR011009 -
Phac8g02834 1022 Gene3D Phosphorylase Kinase; domain 1 690 808 - -
Phac8g02834 1022 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 342 655 - -
Phac8g02834 1022 Pfam Protein kinase domain 732 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02834 1022 SUPERFAMILY L domain-like 377 643 - -
Phac8g02834 1022 ProSitePatterns Tyrosine protein kinases specific active-site signature. 854 866 IPR008266 GO:0004672|GO:0006468
Phac8g02834 1022 FunFam MDIS1-interacting receptor like kinase 2 809 1006 - -
Phac8g02834 1022 FunFam Nuclear pore complex protein NUP107 35 191 - -
Phac8g02834 1022 ProSiteProfiles Leucine-rich repeat profile. 536 557 IPR001611 GO:0005515
Phac8g02834 1022 PANTHER LEUCINE RICH REPEAT KINASE 2 300 1004 - -
Phac8g02834 1022 Gene3D Ribonuclease Inhibitor 200 324 IPR032675 -
Phac8g02834 1022 Gene3D Ribonuclease Inhibitor 35 196 IPR032675 -
Phac8g02834 1022 SUPERFAMILY L domain-like 64 361 - -
Phac8g02834 1022 Pfam Leucine rich repeat 512 571 IPR001611 GO:0005515
Phac8g02834 1022 SMART LRR_typ_2 102 126 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 246 270 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 294 317 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 342 366 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 486 510 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 582 605 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 558 581 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 174 198 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 222 245 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 438 462 IPR003591 -
Phac8g02834 1022 SMART LRR_typ_2 534 557 IPR003591 -
Phac8g02834 1022 Gene3D Ribonuclease Inhibitor 325 654 IPR032675 -
Phac8g02834 1022 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Phac8g02834 1022 Gene3D Transferase(Phosphotransferase) domain 1 809 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02834 Phac-Chr8 37219822 37223275 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02834 25 902 Receptor kinase-like Gene Family AT4G08850 44.275 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac8g02834 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02834 - - vra:106762950 1658.66