Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02832 ATGATGTGCACAAAGCTTGTAACATTTCAGTTTATTCTCATCACGTTTTTCTTTTTACTTTTAAGATTCTCTTCCTTGGAAGTTTCTGGTGTTTCTTTAGCCAACGGTGCTGTTATGGTTGGCTATGAAGCTGCTGAAGATGAAGACATTGAAGCAAGTGCCCTATTGAGGTGGAAAGCCAGCCTTGATAACCAAAGCCAGGTTTCCTTGTCTTCTTGGTCTACTTTTACTAGCCCTTGCAAATGGAAGGGAATAGTTTGTGATGAATCCAACTCTGTCAGCACTATAAATCTTGCAAAATTTGGACTAAAAGGTACACTTCTCAATCTCAGTTTCTCATCATTTCCAAAGCTTATGAGGTTGTGTTTAAGTTACAACAACCTCAATGGACCTATTCCCCGCGAAATTGGTAACATGTCCAAAATTTCTGAGTTGAAAATGGATCGTAATCATTTTAGTGATTCCATCCCCCAAGAAATAGGGGCACTGCATAACTTGGAGTATCTGTTCTTGAGAGAAAATCAACTTTCTGGATCCATCCCCCCATCAATTGGAATGTTGAAAAATCTTGTTACACTTGATTTATCATCCAACCATCTCTCTGGTACAATCCCTTCAGTTGGAAACTTAACAAATTTAGAACAACTTATCCTCCATAATAACCTTCTCTCTGGTCCTATTCCTGAGGAGTTGCGAGGACTTCATCTTCTCACAACAATCATTTTGTCAACAAATCATCTTTCAGGGCCAATCCCGTCTTCCATAGGAGACCTGGCTAATTTGAGGACACTTCAGCTCACTCGTAATAAACTACATGGATCAATTCCTTCCTCTCTTGGAAACTTGACAAAACTCATTAAATTGTCCATGTCTGAAAACAAGCTTTCAGGATCAATTCCTGCTTCCATAGGAAACTTGGTCAATCTAGAAAAGTTTAACCTTGCTGTAAACAATCTTTCTGGACCTATTCCCTCTACCTTCAGAAATTTGACTAAGCTTACCTTCCTATTACTTCATGTGAACAAACTTACTGGAAGTTTTTCAACAGCAACAAGTAACCTTACCAATTTAGTAAACTTGCAACTAAGCTCTAATCAGTTCACTGGCCCTTTGCCACAATATATTTGCCTTGGAGGGTCACTTTTATTTTTTGCAGCCAATGAGAATCATTTGACTGGTCCAATTCCAACAAGTTTGAAGAACTGCTCCAGTCTTCAAAGGCTCAACCTTGCAGGAAATATGTTGATCGGAAATATTTCAAATGATTTTGGTGTATATCCAAATCTGGAGTACATTGATCTGAGTAGAAATGCCTTAAACGGTCAACTTTCATCAAATTGGGTCAAATGTCATAATCTCATAGGCCTAATGATCTCATACAATAATTTATTCGGTGGTATACCCCCAGAGCTAGGCCAGGCACCTAAATTACAAAAGCTTGAACTGTCTTCAAATCGTCTAACAGGAAAGATTCCAAAAGAACTTGGGAGCTTGACCTACTTGTCTAAACTCTCCATAAGTAAGAACAAACTTTCGGGCAACATTCCCACTGAAATTGGTTCCTTAGAGCAACTTCGGTACCTTGATCTTGCAGCAAATGGTTTAAGTGGTCCAATCCCAAAACGGCTTGGAAGGTTGCATAAGTTATATCACTTGAACTTAAGCCATAACAAATTAATGGAAAGCATTCCATCTGAAATTAGCAAATTGCAATATCTTCAAAAGCTTGATCTTAGTTGGAATTTTTTAAATGGAAAAATTCCAGCAGCACTTGGAGAATTGAAGATGTTGGAAAACTTGAACCTCTCCCACAACAATCTCACTGGAAACATTTCTTCCAGTTTCAAGGATATGATGAGTTTGACAAATGTTGACATATCTAACAACCAATTAGAGGGTCCAATTCCTAACAATCGAGCCTTCCTTAACGCTCCATTTGAAGCATTGAAAAACAACAAAAACTTGTGTGGCCATGCTTCCGGGCTGATGCCTTGCCCGCGGTTGTTGAAACACAATCCTCGTGATAAAAAGGCCATGATGTTGGAAATTTTCCTTCCTTTGGGTGCACTATTTGTGGTTGGAGTTTCACTATATATTCATTTTGTAAAAGCAAGAAAAATAAAAAAGCAAGAGAAAGAAGAACAAACTCGAGATCCTTTTTCTATATTGCATTATGATGGCAAAATAATGTATGAAAATATCATCGAAGCAACAAATGATTTCGATGACAAATATCTCATCGGAAGAGGAGGGTTTGGATGTGTTTACAAGGCCATCTTACCCTCTGGCCACATTGTTGCTGTGAAAAAACTTCAAGTTGAAGTTGACAGGGAAAAGCTTGATTTTAAGGCTTTTAAAACTGAAGTTCGAGCCTTGACAGAAATCAAACATCGTAACATTGTGAAGTTGCATGGGTTTTGTGAACATCCACGCTGTTGTTTATTGGTGTATGAGTTCCTAGAATGTGGCAGCTTGGATAAAGTACTAAACAACGACACACATGCAGAAATGTTTGATTGGAATAAGAGGGTTAAGGTTGTTAAAGGTTTGGCAAATGCTTTGTATCACATGCATCATGGTTGCTCTCCTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTATAAATTTGGAATATGAAGCTCGAATATCTGACTTTGGAACAGCAAAGATTCTAGATCCTAATTCACGTAATTTAACTTCGTTTGCTGGCACTTATGGATATGCTGCACCAGAGCTTGCTTATACAATGGAAGTGAATGAGAAATGCGATGTGTTCAGTTTTGGGGTGCTTTGTATGGAGATAATAATGGGAAATCATCCACGAGATCTCATTTCTTGGATGCATTCACCCTCTTCAACACCAGAGACATCTAATTTGCTATTGAAGGATGTGATAGACCAACGACTTCCTCTTCCAGTGATGCCAGTTGTGCAGGAGGTGGTCTTGATTGCAAAAGTGGCATTTGCTTGTTTGAATGAAAGACCATTTTCTCGTCCAACCATGGAAGATGTGTACAACAAGTTTGTGATGCCTAAGTCACCTTTAATGAGGGAGACACTCAACACCATTGTACTTGGACAACTTCAAAATCATTGA 3105 0.3855 MMCTKLVTFQFILITFFFLLLRFSSLEVSGVSLANGAVMVGYEAAEDEDIEASALLRWKASLDNQSQVSLSSWSTFTSPCKWKGIVCDESNSVSTINLAKFGLKGTLLNLSFSSFPKLMRLCLSYNNLNGPIPREIGNMSKISELKMDRNHFSDSIPQEIGALHNLEYLFLRENQLSGSIPPSIGMLKNLVTLDLSSNHLSGTIPSVGNLTNLEQLILHNNLLSGPIPEELRGLHLLTTIILSTNHLSGPIPSSIGDLANLRTLQLTRNKLHGSIPSSLGNLTKLIKLSMSENKLSGSIPASIGNLVNLEKFNLAVNNLSGPIPSTFRNLTKLTFLLLHVNKLTGSFSTATSNLTNLVNLQLSSNQFTGPLPQYICLGGSLLFFAANENHLTGPIPTSLKNCSSLQRLNLAGNMLIGNISNDFGVYPNLEYIDLSRNALNGQLSSNWVKCHNLIGLMISYNNLFGGIPPELGQAPKLQKLELSSNRLTGKIPKELGSLTYLSKLSISKNKLSGNIPTEIGSLEQLRYLDLAANGLSGPIPKRLGRLHKLYHLNLSHNKLMESIPSEISKLQYLQKLDLSWNFLNGKIPAALGELKMLENLNLSHNNLTGNISSSFKDMMSLTNVDISNNQLEGPIPNNRAFLNAPFEALKNNKNLCGHASGLMPCPRLLKHNPRDKKAMMLEIFLPLGALFVVGVSLYIHFVKARKIKKQEKEEQTRDPFSILHYDGKIMYENIIEATNDFDDKYLIGRGGFGCVYKAILPSGHIVAVKKLQVEVDREKLDFKAFKTEVRALTEIKHRNIVKLHGFCEHPRCCLLVYEFLECGSLDKVLNNDTHAEMFDWNKRVKVVKGLANALYHMHHGCSPPIVHRDISSKNVLINLEYEARISDFGTAKILDPNSRNLTSFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCMEIIMGNHPRDLISWMHSPSSTPETSNLLLKDVIDQRLPLPVMPVVQEVVLIAKVAFACLNERPFSRPTMEDVYNKFVMPKSPLMRETLNTIVLGQLQNH* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02832 1034 SMART LRR_typ_2 546 570 IPR003591 -
Phac8g02832 1034 SMART LRR_typ_2 210 234 IPR003591 -
Phac8g02832 1034 SMART LRR_typ_2 306 329 IPR003591 -
Phac8g02832 1034 SMART LRR_typ_2 594 617 IPR003591 -
Phac8g02832 1034 SMART LRR_typ_2 258 282 IPR003591 -
Phac8g02832 1034 SMART LRR_typ_2 475 498 IPR003591 -
Phac8g02832 1034 SMART LRR_typ_2 354 378 IPR003591 -
Phac8g02832 1034 SMART LRR_typ_2 163 187 IPR003591 -
Phac8g02832 1034 SUPERFAMILY Protein kinase-like (PK-like) 722 1010 IPR011009 -
Phac8g02832 1034 FunFam MDIS1-interacting receptor like kinase 2 820 1017 - -
Phac8g02832 1034 Pfam Leucine rich repeat 475 535 IPR001611 GO:0005515
Phac8g02832 1034 Pfam Leucine rich repeat 260 319 IPR001611 GO:0005515
Phac8g02832 1034 Gene3D Transferase(Phosphotransferase) domain 1 820 1020 - -
Phac8g02832 1034 PRINTS Leucine-rich repeat signature 594 607 - -
Phac8g02832 1034 PRINTS Leucine-rich repeat signature 190 203 - -
Phac8g02832 1034 FunFam Leucine-rich repeat receptor protein kinase MSP1 704 819 - -
Phac8g02832 1034 SUPERFAMILY L domain-like 72 291 - -
Phac8g02832 1034 ProSiteProfiles Leucine-rich repeat profile. 548 570 IPR001611 GO:0005515
Phac8g02832 1034 Gene3D Ribonuclease Inhibitor 162 235 IPR032675 -
Phac8g02832 1034 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 354 668 - -
Phac8g02832 1034 PANTHER LEUCINE RICH REPEAT KINASE 2 279 1016 - -
Phac8g02832 1034 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Phac8g02832 1034 Gene3D Ribonuclease Inhibitor 50 161 IPR032675 -
Phac8g02832 1034 Gene3D Phosphorylase Kinase; domain 1 701 819 - -
Phac8g02832 1034 Pfam Leucine Rich Repeat 573 593 IPR001611 GO:0005515
Phac8g02832 1034 Pfam Leucine Rich Repeat 597 616 IPR001611 GO:0005515
Phac8g02832 1034 Gene3D Ribonuclease Inhibitor 381 666 IPR032675 -
Phac8g02832 1034 Gene3D Ribonuclease Inhibitor 236 380 IPR032675 -
Phac8g02832 1034 ProSitePatterns Protein kinases ATP-binding region signature. 747 770 IPR017441 GO:0005524
Phac8g02832 1034 Pfam Leucine rich repeat N-terminal domain 51 88 IPR013210 -
Phac8g02832 1034 Pfam Leucine Rich repeats (2 copies) 165 204 IPR025875 -
Phac8g02832 1034 SUPERFAMILY RNI-like 264 638 - -
Phac8g02832 1034 Pfam Protein kinase domain 743 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02832 1034 ProSitePatterns Tyrosine protein kinases specific active-site signature. 865 877 IPR008266 GO:0004672|GO:0006468
Phac8g02832 1034 FunFam Nuclear pore complex protein NUP107 48 206 - -
Phac8g02832 1034 SMART LRR_sd22_2 282 308 - -
Phac8g02832 1034 SMART LRR_sd22_2 570 602 - -
Phac8g02832 1034 SMART LRR_sd22_2 330 356 - -
Phac8g02832 1034 SMART LRR_sd22_2 498 524 - -
Phac8g02832 1034 SMART LRR_sd22_2 187 212 - -
Phac8g02832 1034 SMART LRR_sd22_2 546 565 - -
Phac8g02832 1034 SMART LRR_sd22_2 163 178 - -
Phac8g02832 1034 ProSiteProfiles Protein kinase domain profile. 741 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02832 1034 FunFam Leucine-rich repeat receptor protein kinase EMS1 251 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02832 Phac-Chr8 37199845 37203381 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02832 51 913 Receptor kinase-like Gene Family AT4G08850 45.122 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac8g02832 Pkinase 3.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02832 - - gmx:100800924 1491.09