Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02808 ATGGAGAACAGATTCAGTTTATCAGTTTTCTTCATGTTATGGGCTATGGTGCTTAATGCAGAATCCAAGTGTAGGAGGGATTGTGATTTAGCTCTAGCTTCCTACTATCTAACAGGAGGTGATTTGACATATATATCAAAGATTATGAAATCTCAGGTTGTTTCAAAAGCTGAAGATATTCTCCCCTACAACAGTGAAACCATAAAAAACAAAGACCAGGTGCAAGCCTTTACCAGAGTGAACGTTCCATTCCCTTGTGATTGCATTGGAGAGTTTCTTGGCCATATATTCCATTATGACGTTGTATCAGGTGACACTTACACGTCCATTGCCAGTCAGAATTATTCCGATTTGACCACTACTCAGTTGTTGCAGAGCTTCAACTCCTATTCACCAACTAGTATTCCTGATACCGTGACTCTTGATGTCTTCATTAACTGTTCCTGTGGGAACAGTGAAGTTTCCAAGGATTATGGATTGTTCATCACATACCCGCTTAGACCTGAGGATTCTTTGCAGTCAATTGCCAACAAGACTGGGATAGAGAGTGACTTGCTGCTTAAGTACAACCCCGGTGTGAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGGAAAGACCAAAATGGTGGCTATGTGCCCCTTCATCTAAGAACCGGAGGTTGGACCTTCTCACTCCCTCAAAAATATCAGACACAAGGTCAGGATATTCTCAAAGTACAATGTAAACCAACTTTCTTCTCATATATTGTTTCTACAAAAGCAGGTCTTGCACTTCCAGTTATCGCTGGAATGTCTGTTGGAGTAGTAACGATACTTCTGCTATTGGCATTTTGTGTGTATGTTACATATTACCGAAGAAAGAAGAATTTGCTCCCAGAAGAATTCAGGATGAACTCGGCTAGAGTTAAGAATGATGAAGCCTCTGGTGGCCCTGATGCAGAAAATGGAGCCAACACCATTAGGGTGGACAAATCAGGAGAGTTTTCATATGAAGAACTAGCCAATGCCACAAATAACTTCAATCTGGCTAATAAAGTTGGTCAAGGTGGTTTCGGGGAAGTCTATTACGCAGAGCTTAATGGCGAGAAAGTTGCAGTAAAAAAGATGGACTTGCACGCATCAAGGGAATTTTTAGCTGAACTGAAAGTGTTGACACGTGTTCATCACTTGAACCTGGTGCGCTTGATTGGATATTGTATTGAGGATTCCCTTTTCCTTGTTTATGAATACATTGAGAATGGCAACTTAAGACAACATCTACGTGGATCAGGTTTTGATCCTTTGCCATGGTCGGCCCGAGTGCAAATTGCTCTGGATTCAGCCAGAGGTCTGCAGTACATTCATGAGCATACTGTGCCTGCATATATCCATCGAGACATAAAGTCAGAAAACATTTTAATAGACAAAAAATTATGTGCCAAGGTTGCAGACTTTGGTTTAACCAAGTTGATTGATGTTGGAAGTTCATCACTTCACACAGCTAATATGAAGGGGACATTTGGTTACATGCCACCAGAATATGCATATGGCAATGTTTCTCCCAAAATAGATGTCTATGCTTTCGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAGAAGCATTGTTCGTGGGTGGTGTACATGGTGCTGAATCAAAGGGCCTTGTGTCTTTGTTTGATGAGGCTTTTGAAGAGCAAGATCCCACAGAATGTCTTAAAAAACTGGTGGATCCTAGGTTAGGAGATAACTACCCAATCGATTCAGTTAGTAAGATGGCACAACTTGGAAAAGCATGCACAGAGAGTAATCCACAACAACGTCCAAATATGAGTTCTGTTGTGGTTACTCTCACAGCACTTACTTCAACTAGTGAGGATTGGGATATTGCTTCCATCATTGAAAATCCAACTCTAGCAAATCTAATTGATCATTGA 1920 0.4078 MENRFSLSVFFMLWAMVLNAESKCRRDCDLALASYYLTGGDLTYISKIMKSQVVSKAEDILPYNSETIKNKDQVQAFTRVNVPFPCDCIGEFLGHIFHYDVVSGDTYTSIASQNYSDLTTTQLLQSFNSYSPTSIPDTVTLDVFINCSCGNSEVSKDYGLFITYPLRPEDSLQSIANKTGIESDLLLKYNPGVNFSQGSGLVYIPGKDQNGGYVPLHLRTGGWTFSLPQKYQTQGQDILKVQCKPTFFSYIVSTKAGLALPVIAGMSVGVVTILLLLAFCVYVTYYRRKKNLLPEEFRMNSARVKNDEASGGPDAENGANTIRVDKSGEFSYEELANATNNFNLANKVGQGGFGEVYYAELNGEKVAVKKMDLHASREFLAELKVLTRVHHLNLVRLIGYCIEDSLFLVYEYIENGNLRQHLRGSGFDPLPWSARVQIALDSARGLQYIHEHTVPAYIHRDIKSENILIDKKLCAKVADFGLTKLIDVGSSSLHTANMKGTFGYMPPEYAYGNVSPKIDVYAFGVVLYELISAKEALFVGGVHGAESKGLVSLFDEAFEEQDPTECLKKLVDPRLGDNYPIDSVSKMAQLGKACTESNPQQRPNMSSVVVTLTALTSTSEDWDIASIIENPTLANLIDH* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02808 639 FunFam PTI1-like tyrosine-protein kinase 3 413 626 - -
Phac8g02808 639 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Phac8g02808 639 SMART serkin_6 342 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02808 639 CDD LysM 162 194 IPR018392 -
Phac8g02808 639 Gene3D Phosphorylase Kinase; domain 1 314 412 - -
Phac8g02808 639 Pfam Protein tyrosine and serine/threonine kinase 343 611 IPR001245 GO:0004672|GO:0006468
Phac8g02808 639 Gene3D Transferase(Phosphotransferase) domain 1 413 630 - -
Phac8g02808 639 Pfam LysM domain 99 133 IPR018392 -
Phac8g02808 639 Pfam LysM domain 167 195 IPR018392 -
Phac8g02808 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Phac8g02808 639 SUPERFAMILY Protein kinase-like (PK-like) 324 612 IPR011009 -
Phac8g02808 639 ProSiteProfiles Protein kinase domain profile. 342 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02808 639 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 625 IPR044812 GO:0019199|GO:0045087
Phac8g02808 639 CDD STKc_IRAK 348 615 - -
Phac8g02808 639 FunFam LysM receptor kinase 2 321 412 - -
Phac8g02808 639 ProSiteProfiles LysM domain profile. 162 205 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02808 Phac-Chr8 37059825 37069253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02808 7 637 Receptor kinase-like Gene Family AT3G21630 53.023 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phac8g02808 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02808 - K13429 gmx:100803042 923.309