Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac8g02796 | ATGTCAGATGACATGCTCATTCATTTCTCGTCCAACTCTTCAAACCAATCTGATCATTCCCTGCCTACAAAAATTGCGAAGTTGGAAGCTCGTATGATTGGTAAGGGTTCCTCAACCTCTTCTCAGCAACCAGGTTGGTCCACTGTGTCTGTTCCTTCGGCTGGGAAATTTGGTCGGGCTGCTGAAAATTCCGCTGAACCGTCAACTTCAAGTGATTCTGACGATGATAATGGTGGGGCATTCTTGATTCAAGCCAACACACAGAAGCGCCAAAAACTTCAAGAAGATGGCAACGCCAGTGTTTTTGAACGTGTTGAGGTTGTTACTGATGGAAGGCAAACAAGTTTGGATTCTGTGGAGACAAAAATGCATGTTGAAATGAGTAGAAAGAAACATGGTCGTGGAAGAGGGAGTTCTGGTTCGGGTAGAGGCCGGGGTTCCAGAGTTAATGATCAGACCAAAATACTCATTTCTCCTCCAACTGTTTTGGCTTCAAATGGTCAGATCGACAATGTATACCATAAAGGTGGCAAACCCAGTGATCAGTTTCATAGTGATAATTGTGTTTCATTAGAGGATGAAGTTGCATCTTTACAAGCTAAAGTTGTTGCTTTGGAGGAGGAATTGCGTAAATCAAAGCAAGAAGCAGTTGATTATCAGAATCTTACTCAACAGTTAGAACAGGAACTGAAGGAGATGACTGATCATGAACAACAAATGAAGCCTAAGAGAATGAAAATAATATCTGACTTGCTGATATCCGTTTCAAAGGCTGAAAGACAAGAAGCAAGGCTGAAAGTACGACAAGACTCGTTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTAATATCTGAGACCTGGGAAGATGGTCAAGCTTTAAAGGATCTGAATGCCCAGCTTAAACAACTAGTAGAAACAAAGGAGGCGATAGAGCGGCAGCGCAAATTATTTAAGAAAAAGCAATCTGATAAGGGTGATGGGACAGATGCAGAGGCTGCATTGCCAGAAGATATTCTAATTCACGATGAAATTTACAAATGTCGATTAGCTAGCCTTAAAAGAGAAGAGGAAATCGTTTTGCGAGAGAGGGATCGATATGAAATAGAGAAGGGAAGGTTAATTCGGGAGATGAAACGCATACGAGATGAAGATGGTTCACGGTTTAACAACTTTCAGATTCTAAATCATCGTTATGCTCTTCTTAACCTTCTTGGGAAGGGAGGATTCAGTGAGGTGTACAAGCAGGCTTTCGATTTGGTGGACCATAGATATGTTGCATGCAAACTTCATGGCTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATACGACATGCAATTCGGGAGTATAATATTCACAAGACTCTTGTACATCGCCACATTGTTCGTTTGTGGGACATCTTTGAGATTGATCAAAACACATTCTGCACCGTTCTGGAGTATTGTAGTGGGAAGGATCTTGATGCTGTTCTTAAAGCAACACCTATATTATCTGAGAGGGAGGCTAAGGTTATCATAGTTCAGATTTTTCAAGGCCTCATTTACATGAATAAAAGAACACAGAAGATTATCCATTATGATTTGAAGCCTGGAAATGTTCTGTTTGATGAGCTTGGTGTTGCCAAAGTGACTGATTTTGGTCTTAGTAAGATAGTGGAGGATGATGTGGGATCCCAAGGTATGGAACTTACATCTCAGGGAGCTGGAACATATTGGTAA | 1734 | 0.4123 | MSDDMLIHFSSNSSNQSDHSLPTKIAKLEARMIGKGSSTSSQQPGWSTVSVPSAGKFGRAAENSAEPSTSSDSDDDNGGAFLIQANTQKRQKLQEDGNASVFERVEVVTDGRQTSLDSVETKMHVEMSRKKHGRGRGSSGSGRGRGSRVNDQTKILISPPTVLASNGQIDNVYHKGGKPSDQFHSDNCVSLEDEVASLQAKVVALEEELRKSKQEAVDYQNLTQQLEQELKEMTDHEQQMKPKRMKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLKQLVETKEAIERQRKLFKKKQSDKGDGTDAEAALPEDILIHDEIYKCRLASLKREEEIVLRERDRYEIEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKQAFDLVDHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILSEREAKVIIVQIFQGLIYMNKRTQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYW* | 578 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac8g02796 | 577 | Coils | Coil | 188 | 239 | - | - | |
| Phac8g02796 | 577 | PANTHER | MIXED LINEAGE PROTEIN KINASE | 10 | 577 | - | - | |
| Phac8g02796 | 577 | MobiDBLite | consensus disorder prediction | 34 | 50 | - | - | |
| Phac8g02796 | 577 | Pfam | Protein kinase domain | 402 | 562 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phac8g02796 | 577 | Gene3D | Transferase(Phosphotransferase) domain 1 | 392 | 577 | - | - | |
| Phac8g02796 | 577 | SUPERFAMILY | Protein kinase-like (PK-like) | 391 | 576 | IPR011009 | - | |
| Phac8g02796 | 577 | MobiDBLite | consensus disorder prediction | 63 | 80 | - | - | |
| Phac8g02796 | 577 | Coils | Coil | 352 | 386 | - | - | |
| Phac8g02796 | 577 | MobiDBLite | consensus disorder prediction | 126 | 149 | - | - | |
| Phac8g02796 | 577 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Phac8g02796 | 577 | SMART | serkin_6 | 401 | 576 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phac8g02796 | 577 | ProSiteProfiles | Protein kinase domain profile. | 401 | 577 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phac8g02796 | 577 | MobiDBLite | consensus disorder prediction | 1 | 80 | - | - | |
| Phac8g02796 | 577 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 528 | 540 | IPR008271 | GO:0004672|GO:0006468 | |
| Phac8g02796 | 577 | Coils | Coil | 296 | 323 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac8g02796 | Phac-Chr8 | 36916485 | 36923572 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac8g02796 | 391 | 558 | Receptor kinase-like Gene Family | AT5G16000 | 34.706 | 6.44e-15 | 75.9 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | TLK | Phac8g02796 | Pkinase | 5e-33 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac8g02796 | K08864 | - | gmx:100789927 | 989.564 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phac8g02796 | 8 | 36916485 | 36923572 | Phac8g02796 | 8 | 36916485 | 36923572 | ECH |