Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02757 ATGTCTTCTTTCGAGACAAATGGAACTGAGAATGAGGGTTCTCTGCCTCCCCCACCACCTGCTATCCCATCAGATGTTGTTCCTGTCAAACTGGAGCCTGAAAAGAAAAAGGTTTTGAGGCTTCCAATAGCCAGACGTAGCCTTGCTTCTAAAGGGACGAAGTTGCGACTTCTCACCAATCACTTCAAAGTGAATGTTGGAAACACTGATGGTCACTTTTTTCAGTATAGTGTATCTCTTTCTTATGAAGATGGACGTCCGGTAGAGGGCAAGGGTGTAGGGAGAAAGGTGCTTGACAGGGTGCAGGAGACATATAATTCTGAATTGAACGGGAAGAATTTTGCTTATGATGGCGAGAAAACGCTTTTTACACTTGGCTCTCTCGCCCGCAACCGGCTTGAGTTTACTGTTGTTCTGGAGGATGTTGTTTCTACTAGCAGAAGTAATGGAAATGGAAATGTCAGCCCTGATGGAAATGGAGAATTTAGTGAGAGTGACAAGAAGAGAATGAGGCGCCCAAATAGAGCTAAAAGTTTTAAAGTTGAGATAAGTTTTGCTTCAAAGATTCCGTTGCAGGCCATTGTCAATGCTCTCCGTGGACAGGATTCTGATAATTATCAAGAAGCTATAAGAGTTCTTGATATCATTCTAAGGCAGCATGCTGCTAAACAAGGCTGTTTGCTTGTGCGCCAGTCATTCTTCCATAATGATCCGAAGAATTTTACTGATGTTGGAGGAGGTGTGCTTGGCTGCAGGGGATTCCATTCTAGTTTTCGAACCACACAGAGTGGCTTGTCACTTAATATTGATGTCTCAACCACAATGATAGTTACTCCTGGGCCTGTGGTGGACTTCCTCATTTCCAATCAGAATGTAAAAGATCCATTCAAACTCGACTGGGTTAGGGCCAAGAGGACCCTGAAAAATTTGAGGATTAAAGCAAGTCCATCCAATCAAGAGTATAAAATAACCGGACTTAGTGACAAGCCTTGCAATGAGCAACTGTTTACATTGAAGAAAAAGGGTGGAGTGGATGGTGATGATACTGAGGAGGTGACTGTGTATGATTATTTTGTTAATCATCGAAACATAGATCTCCGCTACTCGGGTGAACTTCCATGTATTAATGTTGGAAAGCCCAAGCGGCCAACATATTTTCCTGTTGAGCTCTGCTCTTTGGTATCCCTTCAACGTTACACGAAAGCTCTATCCACACTCCAAAGGTCCTCATTGGTGGAGAAGTCCAGGCAGAAGCCTCAGGAACGGATGAGAGTCTTGACAGATGCTTTGAGTCGAAGCAATTATGGTTCTGAACCTATGCTTCGCAATTGTGGTATTTCTATTAGCTCTGGCTTTACTGAAGTTGAAGGTCGGGTTTTACAAGCTCCAAGGTTGAAGTTTGGAAATGGGGAGGACTTCAATCCAAGAAATGGGAGATGGAACTTTAATCAAAAGAAATTAGTTAGGCCAACAAAAATTGAAAAATGGGCTGTAGTTAACTTTTCTGCCCGATGTGATGTACGAGGACTTGTTAGGGATCTCCTCAAGTGCGGTCAAATGAAAGGAATAGCAATCGAACCACCTTTTGATGTATTTGAAGAAGATGGTCGCAATAGACGATCCCCACCTCTTGTTAGAGTGGAGAAAATGCTTGAATTCGTGCAGTCTAAACTTCCTGGGGCTCCGCAATTTCTTCTTTGTCTGCTTCCTGAGAGAAAAAATTCTGACCTTTATGGTCCGTGGAAGAAGAGAAATCTTGCTGATTTTGGAGTTGTTACCCAGTGCATAGCTCCACAAAAGGTCAATGATCAATATTTAACTAATGTTTTATTGAAGATCAATGCTAAGCTTGGAGGCTTGAATTCATTGTTAGGCGTTGAACATGCTCCTTCCATCCCTGTTGTTTCCAAAGCTCCCACCATCATTATTGGCATGGATGTGTCTCATGGCTCCCCAGGGCAAACAGATATTCCTTCAATTGCAGCGGTGGTTAGCTCTCGAGAGTGGCCCCTAATATCAAAGTACAGGGCATGTGTCCGTACCCAGTCTCCGAAGGTTGAAATGATTGACAATTTGTTTAAGAAAGTATCTGAAGAGGTGGATGATGGCATAATTAGGGAGCTACTACTTGATTTCTATAAAAGTTCTGGGAATAGAAAGCCTGAAAATATAATCATCTTCAGAGATGGTGTTAGTGAGTCCCAGTTCAATCAAGTTTTAAACATCGAACTTGACCAAATTATTGAGGCTTGCAAGTTTTTAGATGCTACTTGGGATCCCAAATTTTTGGTCATTGTTGCTCAAAAAAACCATCATACTAAATTCTTTCAAGCTGGTTCTCCTGACAATGTTCCTCCTGGGACTGTAATTGATAGCAAAATTTGTCATCCTCGGAACTATGATTTTTACATGTGTGCACATGCTGGAATGATAGGTACAAGTAGACCCGCACATTATCATGTTTTGTTAGATGAGATTGGGTTTTCAGCCGATGATCTGCAGGAGCTTGTACACTCCTTATCATACGTGTATCAGAGGAGCACCACGGCCATATCTGTCGTTGCTCCAATCTGTTATGCTCACTTGGCTGCTACTCAGATGGGTCAGTTTATGAAATTTGAGGAAAGATCGGAGACAGCTTCTAGTCATGGTGGTGCTCACACTGTCCCTCAATTGCCTAGACTGAATGATAATGTCTCTAGCTCAATGTTCTTCTGCTGA 2721 0.4245 MSSFETNGTENEGSLPPPPPAIPSDVVPVKLEPEKKKVLRLPIARRSLASKGTKLRLLTNHFKVNVGNTDGHFFQYSVSLSYEDGRPVEGKGVGRKVLDRVQETYNSELNGKNFAYDGEKTLFTLGSLARNRLEFTVVLEDVVSTSRSNGNGNVSPDGNGEFSESDKKRMRRPNRAKSFKVEISFASKIPLQAIVNALRGQDSDNYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFTDVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVTPGPVVDFLISNQNVKDPFKLDWVRAKRTLKNLRIKASPSNQEYKITGLSDKPCNEQLFTLKKKGGVDGDDTEEVTVYDYFVNHRNIDLRYSGELPCINVGKPKRPTYFPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDALSRSNYGSEPMLRNCGISISSGFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNQKKLVRPTKIEKWAVVNFSARCDVRGLVRDLLKCGQMKGIAIEPPFDVFEEDGRNRRSPPLVRVEKMLEFVQSKLPGAPQFLLCLLPERKNSDLYGPWKKRNLADFGVVTQCIAPQKVNDQYLTNVLLKINAKLGGLNSLLGVEHAPSIPVVSKAPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKKVSEEVDDGIIRELLLDFYKSSGNRKPENIIIFRDGVSESQFNQVLNIELDQIIEACKFLDATWDPKFLVIVAQKNHHTKFFQAGSPDNVPPGTVIDSKICHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEERSETASSHGGAHTVPQLPRLNDNVSSSMFFC* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02757 906 CDD PAZ_argonaute_like 279 394 - -
Phac8g02757 906 Pfam Argonaute linker 1 domain 229 276 IPR014811 -
Phac8g02757 906 Pfam Mid domain of argonaute 474 526 IPR032473 -
Phac8g02757 906 Pfam Piwi domain 565 872 IPR003165 GO:0003676
Phac8g02757 906 Gene3D - 631 906 IPR036397 GO:0003676
Phac8g02757 906 Pfam N-terminal domain of argonaute 54 217 IPR032474 -
Phac8g02757 906 Pfam PAZ domain 283 411 IPR003100 GO:0005515
Phac8g02757 906 SUPERFAMILY PAZ domain 274 435 IPR036085 GO:0005515
Phac8g02757 906 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 49 874 - -
Phac8g02757 906 FunFam Protein argonaute 3 632 906 - -
Phac8g02757 906 Pfam Argonaute linker 2 domain 421 467 IPR032472 -
Phac8g02757 906 Gene3D paz domain 273 399 - -
Phac8g02757 906 SMART Piwi_a_2 564 872 IPR003165 GO:0003676
Phac8g02757 906 Gene3D - 459 625 - -
Phac8g02757 906 SMART DUF1785_2 227 279 IPR014811 -
Phac8g02757 906 MobiDBLite consensus disorder prediction 145 175 - -
Phac8g02757 906 ProSiteProfiles PAZ domain profile. 299 395 IPR003100 GO:0005515
Phac8g02757 906 MobiDBLite consensus disorder prediction 1 25 - -
Phac8g02757 906 MobiDBLite consensus disorder prediction 145 160 - -
Phac8g02757 906 FunFam Protein argonaute 7 274 399 - -
Phac8g02757 906 SUPERFAMILY Ribonuclease H-like 548 870 IPR012337 -
Phac8g02757 906 CDD Piwi_ago-like 439 866 IPR045246 -
Phac8g02757 906 ProSiteProfiles Piwi domain profile. 564 872 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02757 Phac-Chr8 36628458 36637859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02757 45 906 Eukaryotic Initiation Factors Gene Family AT5G43810 35.430 1.35e-164 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02757 K11593 - gmx:100779439 1587.39