Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02756 ATGCCTCTATTGACTTTTGACTTCACAGTTTTGCTTAAGTTTTCAAAGGAGATGTCTTCTTTTGGGACAAATGGAACTGAGAATGAGGATTCCCTGCCTCCGCCACCACCTGCTATCCCAGTGGACGTAGTGCCTGTCAAAGTAGAGAGTGATAAGAAAAAGATTTCAAGGCTTCCAATAGCTAGACGTGGCCTTGCTTCTAAGGGGACGAAGTTGCGACTTCTTACCAATCACTTCAGAGTGAATATTGGAAACACTGATGGTCACTTTTTTCAGTATAGTGTATCTCTTTCTTATGAAGATGGACGACCTGTAGAGGGTAAGGGTGTAGGGAGAAAGGTGCTCGACAGGTTGCAGGAAACATATAATTCTGAATTGAACGGGAAAGATTTTGCTTATGATGGCGAGAAAACTCTTTTTACACTTGGCTCTCTTGCCCGTAATCGTCTTGAGTTTACTGTTGTTCTCGAGGATGTTGTTTCTAATGGCAGAAATAACGGAAATGTCAGCCCTGATGGAAATGGAGAATTCAGTGAGAATGACACAAAGAGAATGAGGCGCCCAAATAGAGCCAAAACTTTTAAAGTTGAGATAAGTTTTGCTTCAAAGATTCCATTGCAGGCCATTGCCAATGCTCTCCGTGGACAGGATTCTGATAATTATCAAGAAGCAATAAGAGTTCTTGATATCATTCTGAGGCAGCATGCTGCTAAACAAGGCTGTTTGCTTGTGCGCCAATCATTCTTCCATAATGATCCGAAGAATTTTGCTGATGTAGGAGGAGGTGTCCTTGGCTGCAGGGGATTCCATTCTAGTTTTCGAACCACACAGAGTGGCTTGTCACTTAATATAGATGTCTCAACCACAATGATAGTTACTCCTGGACCTGTGGTGGACTTCCTCATTTCCAATCAGAATGTACAAAATCCATTTGGTATCGACTGGGTTAAGGCCAAGAGGACCCTGAAAAATTTGAGGATTAAAGCAAGTCCATCCAATCAAGAGTATAAAATAACCGGACTTAGTGACAAGCCTTGCAATGAGCAACTGTTTACATTGAAGAAAAAGGGTGGAGTGGATGGTGATGATACTGAGGAGGTGACTGTGTATGATTATTTTGTTAATCATCGAAATATAGATCTCCGCTACTCGGGGGAACTCCCATGTATTAATGTGGGGAAGCCCAAGCGGCCAACATATCTTCCTCTTGAGCTTTGCTCTTTGGTATCCCTTCAACGTTACACTAAAGCTCTATCCACACTCCAAAGGTCCTCATTGGTAGAGAAGTCCAGGCAGAAGCCGCCAGAGAGGAGGAGAGTGTTGACAGATGCTTTGAGTCGTAGCAATTATGGTTCTGAACCTATGCTTCGTAATTGTGGTATTTCTATCAACTCTAGCTTTACTGATGTAGAAGGTCGAGTTTTACAGGCTCCGAGGTTAAAATTTGGAAATGGGGAGGATTTCAATCCAAGAAATGGGAGGTGGAACTTCAATCAAAAGAAATTAGTTAAGCCAACAAAAATTGAAAAATGGGCTGTGGTTAATTTTTCTGCCCGATGTGATGTACGAGGACTTGTTAGGGATCTCCTCAAGTGCGGTCAAATGAAAGGAATAGCAATCGAACCACCTTTTGATGTATTTGAAGAAGATGGTCGCAATAGACGATCCCCACCTCTTGTTAGAGTGGAGAAAATGCTTGAATTCGTGCAGTCTAAACTTCCTGGGGCTCCGCAATTTCTTCTTTGTCTTCTTCCTGAAAGAAAAAATTCCGATCTTTATGGTCCGTGGAAGAAGAGGAATCTTGCTGATTTCGGAGTTGTTACCCAGTGTATAGCGCCTCAAAGGGTCAATGATCAATATTTAACTAATGTTTTACTGAAGATCAATGCTAAGCTTGGTGGCCTGAATTCTATGTTAGGCGCTGAACATTCTCCTTCCATCCCTATTGTTTCCAGAGCTCCCACGATCATTATTGGCATGGATGTGTCTCATGGCTCCCCGGGCCAAACTGATATTCCTTCAATTGCAGCGGTGGTTAGCTCTCTAGAGTGGCCTCTAATATCAAAGTATAGGGCATGTGTCCGTACCCAGTCTCCAAAGGTTGAAATGATTGACAATTTGTTCAAGAAAGTCTCTGATGGGGTGGATGAAGGCATAATTAGGGAGCTGCTGCTTGATTTCTATAGGAGTTCTGGGAATAGAAAGCCTGACAATATAATCATTTTCAGGGACGGTGTCAGTGAGTCCCAGTTCAATCAAGTTTTAAATATCGAGCTTGATCAAATTATTGAAGCTTGCAAGTTTTTAGATGAAAAGTGGAATCCCAAATTTTTGGTTATTGTTGCTCAAAAGAACCATCATACTAAGTTCTTTCAAGCCGATTCTCCTGACAACGTTCCTCCTGGAACTGTTATTGATAACAAAATTTGTCATCCTCGGAACTATGATTTTTACATGTGTGCACATGCTGGAATGATTGGTACTAGTAGACCTACACACTATCATGTTCTGTTAGATGAGATTGGGTTTACAGCCGATGAACTGCAGGAGCTTGTGCACTCGTTATCATACGTGTATCAGAGGAGCACCACTGCTATATCCGTTGTTGCTCCAATTTGTTATGCTCACTTGGCTGCTACTCAGATGGGACAGTTTATGAAATTTGAGGAGAGATCGGAGACAGCTTCAAGTCATAGTGGTGCTCACCCTGTCCCTCAGTTGCCTAAATTGAATGATAATGTCTCTAGCTCAATGTTCTTTTGTTGA 2766 0.4212 MPLLTFDFTVLLKFSKEMSSFGTNGTENEDSLPPPPPAIPVDVVPVKVESDKKKISRLPIARRGLASKGTKLRLLTNHFRVNIGNTDGHFFQYSVSLSYEDGRPVEGKGVGRKVLDRLQETYNSELNGKDFAYDGEKTLFTLGSLARNRLEFTVVLEDVVSNGRNNGNVSPDGNGEFSENDTKRMRRPNRAKTFKVEISFASKIPLQAIANALRGQDSDNYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVTPGPVVDFLISNQNVQNPFGIDWVKAKRTLKNLRIKASPSNQEYKITGLSDKPCNEQLFTLKKKGGVDGDDTEEVTVYDYFVNHRNIDLRYSGELPCINVGKPKRPTYLPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPPERRRVLTDALSRSNYGSEPMLRNCGISINSSFTDVEGRVLQAPRLKFGNGEDFNPRNGRWNFNQKKLVKPTKIEKWAVVNFSARCDVRGLVRDLLKCGQMKGIAIEPPFDVFEEDGRNRRSPPLVRVEKMLEFVQSKLPGAPQFLLCLLPERKNSDLYGPWKKRNLADFGVVTQCIAPQRVNDQYLTNVLLKINAKLGGLNSMLGAEHSPSIPIVSRAPTIIIGMDVSHGSPGQTDIPSIAAVVSSLEWPLISKYRACVRTQSPKVEMIDNLFKKVSDGVDEGIIRELLLDFYRSSGNRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQADSPDNVPPGTVIDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFTADELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEERSETASSHSGAHPVPQLPKLNDNVSSSMFFC* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02756 921 ProSiteProfiles Piwi domain profile. 579 887 IPR003165 GO:0003676
Phac8g02756 921 Gene3D paz domain 288 414 - -
Phac8g02756 921 Pfam N-terminal domain of argonaute 71 232 IPR032474 -
Phac8g02756 921 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 66 889 - -
Phac8g02756 921 SUPERFAMILY Ribonuclease H-like 563 885 IPR012337 -
Phac8g02756 921 SMART Piwi_a_2 579 887 IPR003165 GO:0003676
Phac8g02756 921 Gene3D - 646 921 IPR036397 GO:0003676
Phac8g02756 921 Pfam PAZ domain 298 426 IPR003100 GO:0005515
Phac8g02756 921 FunFam Protein argonaute 7 289 414 - -
Phac8g02756 921 SMART DUF1785_2 242 294 IPR014811 -
Phac8g02756 921 MobiDBLite consensus disorder prediction 164 183 - -
Phac8g02756 921 FunFam Protein argonaute 3 647 921 - -
Phac8g02756 921 Pfam Argonaute linker 1 domain 244 291 IPR014811 -
Phac8g02756 921 CDD Piwi_ago-like 454 881 IPR045246 -
Phac8g02756 921 Pfam Piwi domain 580 887 IPR003165 GO:0003676
Phac8g02756 921 SUPERFAMILY PAZ domain 289 450 IPR036085 GO:0005515
Phac8g02756 921 ProSiteProfiles PAZ domain profile. 314 410 IPR003100 GO:0005515
Phac8g02756 921 Pfam Mid domain of argonaute 489 541 IPR032473 -
Phac8g02756 921 CDD PAZ_argonaute_like 294 409 - -
Phac8g02756 921 Gene3D - 474 640 - -
Phac8g02756 921 Pfam Argonaute linker 2 domain 436 482 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02756 Phac-Chr8 36615076 36622452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02756 62 921 Eukaryotic Initiation Factors Gene Family AT5G43810 35.841 6.22e-167 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02756 K11593 - gmx:100779439 1597.02