Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02736 ATGGGAAACTGCTGCAGAAAACCAGTGGCTCATGTGTCATCCACGAGTTTCTTTGGAAGCTCAAAGTCTCGAAGTAAGACAAAACAGAACTCAAATTCTACTAAAGGAAAAGCTCCTTTAAAAGCTTCAGCATCAAATGTTGACAAACCCATCTCCAACAACCTTAAGTCCTTCACCTTCAATGAACTAAAAGAGGCCACTAAGAACTTCAGGCAAGAAAACTTAATTGGAGAAGGAGGGTTTGGGTTTGTGTACAAGGGATGGATAGATAAGAACACTTATGCTCCCACAAGACCAGGGACTGGAATTGTAGTGGCCATCAAGAAACTTAAACCAGAAAGTTTTCAAGGTCACAGAGAATGGTTGGCAGAGGTCAATTATCTAAGCCAGCTTCACCATGAAAATCTGGTGAAACTTATTGGTTACTGCTCAGATGGTAAAAACAGGCTTCTAGTTTATGAGTTTATGCATAAAGGAAGTTTGGAAAATCATTTATTCAGAAAAGGTGTTCAGCCTATTCCCTGGACTATCCGGATCAACATTGCAGTTGCTGTTGCTAGAGGATTAACATTTTTACATACCCTAGATGCAAATGTTATTTATCGTGATTTAAAGGCAGCAAACATCCTACTTGATTCGGATTTCAACCCAAAGCTTTCGGATTTTGGCTTGGCAAGAGATGGTCCTACAGGAGACAACACTCATGTTTCCACCAGAGTTATTGGATCTCATGGTTATGCTGCACCAGAGTATGTAGCTACAGGTCATTTGACCCCAAGGAGTGATGTATACAGCTTTGGAGTTGTGTTGTTAGAGTTACTAACAGGAAGGCGTGTAGTTGAAGATGAGAGAGCTGGATTTTCAGAAGAAACACTGGTGGATTGGGCAAGGCCATTCCTGAGTGATAGCAGAAGAATTTTGAGAATCATGGACACAAGGTTAGGTGGTCAATACTCCAAGAAAGGAGCACAAGCAGCAGCAACACTTGCACTGCAATGTCTAAATACAGATCCCAAATGCAGACCAACTATGGTGAATGTTCTAGCTGCATTGGAAGCACTAGATTCCTCAAATTCATTCCCAAGGACCCCAAAATCTGGAACAGAGAATCATACAACAAAGCATTCTAGTCATTCCCAAAAATCAGCTACAAATAATAACAGACTATGA 1170 0.4094 MGNCCRKPVAHVSSTSFFGSSKSRSKTKQNSNSTKGKAPLKASASNVDKPISNNLKSFTFNELKEATKNFRQENLIGEGGFGFVYKGWIDKNTYAPTRPGTGIVVAIKKLKPESFQGHREWLAEVNYLSQLHHENLVKLIGYCSDGKNRLLVYEFMHKGSLENHLFRKGVQPIPWTIRINIAVAVARGLTFLHTLDANVIYRDLKAANILLDSDFNPKLSDFGLARDGPTGDNTHVSTRVIGSHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVEDERAGFSEETLVDWARPFLSDSRRILRIMDTRLGGQYSKKGAQAAATLALQCLNTDPKCRPTMVNVLAALEALDSSNSFPRTPKSGTENHTTKHSSHSQKSATNNNRL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02736 389 CDD STKc_IRAK 76 354 - -
Phac8g02736 389 FunFam Serine/threonine-protein kinase BIK1 38 155 - -
Phac8g02736 389 PANTHER OS01G0588500 PROTEIN-RELATED 25 354 - -
Phac8g02736 389 FunFam PTI1-like tyrosine-protein kinase 3 156 362 - -
Phac8g02736 389 SUPERFAMILY Protein kinase-like (PK-like) 45 351 IPR011009 -
Phac8g02736 389 MobiDBLite consensus disorder prediction 358 389 - -
Phac8g02736 389 MobiDBLite consensus disorder prediction 15 47 - -
Phac8g02736 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Phac8g02736 389 Gene3D Phosphorylase Kinase; domain 1 44 155 - -
Phac8g02736 389 Pfam Protein kinase domain 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02736 389 Gene3D Transferase(Phosphotransferase) domain 1 156 378 - -
Phac8g02736 389 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Phac8g02736 389 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02736 389 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02736 Phac-Chr8 36484234 36487743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02736 27 361 Glycoside Hydrolase AT3G07070 49.713 2.19e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac8g02736 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02736 - - pvu:PHAVU_008G205600g 756.518