Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02735 ATGGCTATTGCAGCTCCAGGGCAATTGAACGTGAATGAATCGCCCACTTGTGGATCTAGAAGTGTTGATTGCTTCGAGAAATTGGAGCAAATTGGCGAAGGCACATATGGTCAGGTTTACATGGCTAAAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAGAAAATACGTATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTCTTAAGAAACTACATCATGAAAATGTGATCAAGCTGAAAGAAATTGTGACTTCTCCAGGTCCTGAGAAAGATGAACAGGGGAGGCCAGATGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCACGATTTAACAGGTCTTGCTGACCGACCTGGGATGAGATTTACAGTTCCCCAAATAAAGTGTTACATGAGACAACTTTTGACGGGGCTTCACTATTGTCATGTAAATCAAGTACTTCATCGTGATATCAAAGGCTCAAATCTTCTTATAGACAATGAGGGAAATCTTAAGCTTGCAGATTTTGGACTGGCACGATCATTTTCTAATGACCAAAATGCTAATCTTACAAATCGTGTCATTACATTATGGTACAGACCACCTGAGTTGCTGCTCGGGACAACAAAGTATGGGCCTGCTGTAGATATGTGGTCAGTTGGGTGCATTTTTGCTGAGCTTCTTCAGGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAATTAAATAAAATATATGAGCTGTGTGGAGCACCAACTGAAATCAACTGGCCTGGGGTTTCTAAGATACCTTATTATAATAAATTTATGCCAACAAGGCCAATGAAAAGACGTTTGAGGGAAGTTTTCCGGCATTTTGATCATCATGCTCTGGAGTTGTTGGAGAAGATGTTGACACTTGATCCATCACAGAGAATTACTGCGAAAGATGCACTTGATGCTGAGTATTTCTGGACAGATCCATTACCATGTGACCCCAAGAGTTTACCCAAGTACGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGCCAACAACAACGGCAAAATGAAGAAATGGCTAAGCGTCAGAAAATGCAGCACCCACAGCAGCACACTCGTCTTCCCCCCATTCAGCAGCCTGGACAACATTCCCAAATGCGGTCAGGATCAAACCAACAAATTCATGGCTCTCAACCCCCAGTTGCTGCAGGACCTACTCATCATTATGGGAAGCCTCGAGGTCCATCTGGTGGACCAGGAAGATATCCTCCCAATGGGAACCAAGGTGGAGGATACAATCACCCAAATCGAGGTCAAGGTGGTGGTGGTTATGGTACTGGACCTTATCCTCCTCAAGGGCGGGGGGCGCCTTATGGGTCCAATAGCATGCCTGGTGGTGGTCCTCGTGGTGGTGGTGGTGGTGGTGGCAGCGGCTATGGAGTTGGAGCTCCAAATTATCCCCAACAGGGTGGTCCATATGGGGGTTCAGCAGCTGGTCGTGGCTCAAACATGATGGGTGGAAACCGCAATCAACAACAGTATGGTTGGCAGCAGTAA 1560 0.4494 MAIAAPGQLNVNESPTCGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDQNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLQGKPIFPGKDEPEQLNKIYELCGAPTEINWPGVSKIPYYNKFMPTRPMKRRLREVFRHFDHHALELLEKMLTLDPSQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQQHTRLPPIQQPGQHSQMRSGSNQQIHGSQPPVAAGPTHHYGKPRGPSGGPGRYPPNGNQGGGYNHPNRGQGGGGYGTGPYPPQGRGAPYGSNSMPGGGPRGGGGGGGSGYGVGAPNYPQQGGPYGGSAAGRGSNMMGGNRNQQQYGWQQ* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02735 519 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Phac8g02735 519 CDD STKc_CDK9_like 25 324 - -
Phac8g02735 519 MobiDBLite consensus disorder prediction 335 519 - -
Phac8g02735 519 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Phac8g02735 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Phac8g02735 519 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02735 519 FunFam Cyclin-dependent kinase C-2 122 364 - -
Phac8g02735 519 MobiDBLite consensus disorder prediction 370 400 - -
Phac8g02735 519 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Phac8g02735 519 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02735 519 MobiDBLite consensus disorder prediction 504 519 - -
Phac8g02735 519 PANTHER CELL DIVISION PROTEIN KINASE 23 330 - -
Phac8g02735 519 MobiDBLite consensus disorder prediction 337 366 - -
Phac8g02735 519 FunFam Cyclin-dependent kinase C-2 12 121 - -
Phac8g02735 519 SUPERFAMILY Protein kinase-like (PK-like) 20 332 IPR011009 -
Phac8g02735 519 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02735 Phac-Chr8 36476518 36482207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02735 1 519 Core Cell Cycle Gene Families AT5G10270 75.810 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phac8g02735 Pkinase 2.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02735 K08819 - gmx:100795971 901.353