Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02731 ATGTACCATATCATTAAGGGGCCATGGACGGCAGCAGAAGATGATATATTGGCAGCATATGTGAATAGACATGGACCAGGAAATTGGAACGTAGTGCAGAAAAATACTGGACTAGCTCGTTGTGGGAAAAGCTGTCGTTTAAGGTGGACAAATCATCTAAGACCAGATTTGAGAAGAGGTGCATTCAACGAAGAAGAACAACGCAAAGTCGTTGAGTTACATGCTTTGATGGGAAATAAATGGGCTAAAATGGCACAGGAGTTGCCTGGACGAACAGACAATGAAATAAAGAACTTTTGGAACACTAGACTCAAGAAAAGGAAACGAATTGGCTTAGGAATCTACCCAGATGACATAAAACCTGTGTTTAATGCTCACTGTGTCAATGACTCGGGAGTTGGCACATCATCTTGTGTACCACGTGAGGTCTTCAACAATTTCAACACTCCAAATCAACCACATTTTGTACCACCAATTTCTGAGGTACCTGCAGACATGCAACTGCCTGAGGTACCTAAAGAGATGATGCAACTCGAGGTACCTGAAGAGATGATGCAACTCGAGGTACCTGAAGAGATGATGCAACTGTCCGGGGTACCTGAGGAGATGATGCAAATTGATGAGTTCTTGGAATATTTCGTGAATGGTGGTAACTATGAATGTTCAGGTGGCCTTTCTTCGATATCAGAGCTGCCTCCATTGTCATCATCACGTGATGCATTACAATTTGATGAGCCAATGGTAGTAGTGAGACAGATTTCTGAGACTGGGACTAACCAGCACTATAGACCACGTTCTCCACGCAGCAATGGATATTTGGAGTCCATATTTTATCCACCAAAGAAGGGACAATGGACAACAGCAGAAGATGATATATTGGCAGCATATGTGAGAAGACATGGACCAAGAAATTGGAACATAGTGCAGAAAAATACTGGACTAGCTCGTTGTGGGAAAAGTTGTCGTTTAAGGTGGACAAATCATCTAAGACCAAACTTGAGAAGAGGTGCATTCAACAACGAAGAACAACGCAAAGTGATTGAGTTACATGCTTTGATGGGAAATAAATGGGCTAAAATGGCACAGGAGTTGCCTGGACGAACAGACAATGAAATAAAGAACTTTTGGAACACTAGACTCAAGAAAAGGAAACGAAATGGCTTAGGAATCTACCCAGATGACATAAAACATGTGTTTAATGCTCACAACTCAGAAACTACTCTACCTACTTACACTCACAGTGTCAATGACTCGAGAGTAGGCCCATCATCTTATGTACCACGTGAGGTGTTCAACAATTTCAGCACTCCAAATCAACCACTCCTTGTACCACCAATTTCTGAGGTACCTGTAGACATGCAACTGTCTGAGGTACCTGAAGAGATGATGCAACTCGAGGTACCTGAAGAGATGATGCAACTCGAGGTACCTGAAGAGATGATGCAAATGCCCGGGGTGGCCTTTCTTCGATATCAGAGTTGCCTCCATTGTCATCATCATGTGATGCATTACAATTTGATGCAACTGGAGGTACCTGAGGAGATGATGCAATTGTTCAAAATACCTAAGGAGTTGCTACTTCAAGATGTTGAGTTCTTAGAAGATTTCATGAATGGTGGTGACTATGAATGTTTAGGTGGCCCTTCTTTGATATCAGAGATGCCTCCATTGCCATCATCGCGTGATGCATTACCATTTGATGAGTCAATGGTAGTAGTGAGGCAGGTTCCTAAGGCTGAGACTAACCAGCACTATAGACCACGTTCTCCACGCAACAATGGATATTTGGAGTCCATATTTTATCCACCAAAGGTTTCTCAGGAACCAGAGAATTACTCCAACATGCAAGGAGAGTTAAATATGGTAGTGATCCAATCAAGGATACTTTATACAGCATTATCCATCCCTTTTTCCCACGTTAAAAATTAG 1929 0.423 MYHIIKGPWTAAEDDILAAYVNRHGPGNWNVVQKNTGLARCGKSCRLRWTNHLRPDLRRGAFNEEEQRKVVELHALMGNKWAKMAQELPGRTDNEIKNFWNTRLKKRKRIGLGIYPDDIKPVFNAHCVNDSGVGTSSCVPREVFNNFNTPNQPHFVPPISEVPADMQLPEVPKEMMQLEVPEEMMQLEVPEEMMQLSGVPEEMMQIDEFLEYFVNGGNYECSGGLSSISELPPLSSSRDALQFDEPMVVVRQISETGTNQHYRPRSPRSNGYLESIFYPPKKGQWTTAEDDILAAYVRRHGPRNWNIVQKNTGLARCGKSCRLRWTNHLRPNLRRGAFNNEEQRKVIELHALMGNKWAKMAQELPGRTDNEIKNFWNTRLKKRKRNGLGIYPDDIKHVFNAHNSETTLPTYTHSVNDSRVGPSSYVPREVFNNFSTPNQPLLVPPISEVPVDMQLSEVPEEMMQLEVPEEMMQLEVPEEMMQMPGVAFLRYQSCLHCHHHVMHYNLMQLEVPEEMMQLFKIPKELLLQDVEFLEDFMNGGDYECLGGPSLISEMPPLPSSRDALPFDESMVVVRQVPKAETNQHYRPRSPRNNGYLESIFYPPKVSQEPENYSNMQGELNMVVIQSRILYTALSIPFSHVKN* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02731 642 ProSiteProfiles Myb-like domain profile. 6 53 IPR001005 -
Phac8g02731 642 CDD SANT 61 104 IPR001005 -
Phac8g02731 642 Gene3D - 61 107 - -
Phac8g02731 642 Gene3D - 337 383 - -
Phac8g02731 642 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Phac8g02731 642 CDD SANT 8 53 IPR001005 -
Phac8g02731 642 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 281 329 IPR017930 -
Phac8g02731 642 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 330 384 IPR017930 -
Phac8g02731 642 Gene3D - 281 334 - -
Phac8g02731 642 Gene3D - 5 58 - -
Phac8g02731 642 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Phac8g02731 642 ProSiteProfiles Myb-like domain profile. 281 329 IPR001005 -
Phac8g02731 642 FunFam MYB-related transcription factor 5 58 - -
Phac8g02731 642 ProSiteProfiles Myb-like domain profile. 330 380 IPR001005 -
Phac8g02731 642 SMART sant 281 331 IPR001005 -
Phac8g02731 642 SMART sant 334 382 IPR001005 -
Phac8g02731 642 SMART sant 5 55 IPR001005 -
Phac8g02731 642 SMART sant 58 106 IPR001005 -
Phac8g02731 642 CDD SANT 337 380 IPR001005 -
Phac8g02731 642 SUPERFAMILY Homeodomain-like 3 100 IPR009057 -
Phac8g02731 642 CDD SANT 285 329 IPR001005 -
Phac8g02731 642 FunFam MYB-related transcription factor 281 334 - -
Phac8g02731 642 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 271 602 - -
Phac8g02731 642 Pfam Myb-like DNA-binding domain 9 69 - -
Phac8g02731 642 Pfam Myb-like DNA-binding domain 285 345 - -
Phac8g02731 642 SUPERFAMILY Homeodomain-like 280 376 IPR009057 -
Phac8g02731 642 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02731 Phac-Chr8 36439112 36445546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02731 282 401 MYB Transcription Factor Family AT2G26960 68.595 8.37e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g02731 Myb_DNA-bind_6 3.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02731 K09422 - ccaj:109791291 266.544