Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02730 ATGATACATGCTACTCTATCCTCGTTCTCGGGTGAGGATAAAAGTAGTGATGAAAATAATCTAAAGAAAGGACCATGGACAGCAGCAGAAGATGATATATTGGCAGCATATGTGAGAAGACATGGACCAGGAAATTGGAACGTAGTGCAGAAAAACACTGGACTAGCTCGTTGTGGGAAAAGTTGTCGTTTCAGGTGGACAAATTATCTAAGACCAGATTTGAGAAGAGGAGCATTCAGTAACGAAGAACAACGCAAAGTCATTGAGTTACATGCTTTGATGGGAAATAAATGGGCTAAAATGGCACAGGAGTTGCCTGGACGAACAGATAATGAAATAAAGAACTTTTGGAACAATAGACTCAAGAAAATGAAACGAGTTGGCTTAGGAATCTACCCAGATGACATAAAAATTGTGTTTAATGCTCACAACTCAGAAACTAATCTACCTACTTACACTCACTGTGCCAATGACTCGGGAGTAGGCACATCATCTTGTGTACCACGTGAGGTCTTCAACAATTTCAACACTCCAAAACAACCACTCTTTGTACCACCATTTTCTGAGGTACCTACAGACATGCAACTCTCTGAGGTACCTGAAGAGATGATGCAACTCGAGGTACCTCAAGAGATGATGCAACTGTCTGAGGTACCTGAAGAGATGATGCAAATGTATGAGGTACCTGAGGAGATGCTACTTCAAGATGATGAAATCTTCGAAGACTTCATGTATGGTGGTGACTATGAATGTTTAGGTGGCCCTTCTTCGATATCAGAGATGTCTCCATTGCCATCATCACATGATGCATTACCATTTGATGAGTCAATGGTAGTAGTGAGAGAGGTTCCTGAGGCTGAGACTAACCAGCACTATAGACCACGTTCTCCACGCAGCAATGGATATTTGGAGTCCATATTTTATCCACCAAAGGTTTCTCAAGAACCAGAACCAGAGAATTACTCCAACATGCAAGGAGAGTTAAATGTGGGAAATAGAAAAAATTCTTCTAAGCAGATAAAACATGAAAATAAGATATTTTAA 1044 0.4052 MIHATLSSFSGEDKSSDENNLKKGPWTAAEDDILAAYVRRHGPGNWNVVQKNTGLARCGKSCRFRWTNYLRPDLRRGAFSNEEQRKVIELHALMGNKWAKMAQELPGRTDNEIKNFWNNRLKKMKRVGLGIYPDDIKIVFNAHNSETNLPTYTHCANDSGVGTSSCVPREVFNNFNTPKQPLFVPPFSEVPTDMQLSEVPEEMMQLEVPQEMMQLSEVPEEMMQMYEVPEEMLLQDDEIFEDFMYGGDYECLGGPSSISEMSPLPSSHDALPFDESMVVVREVPEAETNQHYRPRSPRSNGYLESIFYPPKVSQEPEPENYSNMQGELNVGNRKNSSKQIKHENKIF* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02730 347 MobiDBLite consensus disorder prediction 316 335 - -
Phac8g02730 347 FunFam MYB-related transcription factor 22 75 - -
Phac8g02730 347 MobiDBLite consensus disorder prediction 310 347 - -
Phac8g02730 347 Gene3D - 78 124 - -
Phac8g02730 347 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Phac8g02730 347 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Phac8g02730 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
Phac8g02730 347 Gene3D - 22 75 - -
Phac8g02730 347 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Phac8g02730 347 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 11 310 - -
Phac8g02730 347 CDD SANT 78 121 IPR001005 -
Phac8g02730 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 70 IPR017930 -
Phac8g02730 347 MobiDBLite consensus disorder prediction 1 23 - -
Phac8g02730 347 SUPERFAMILY Homeodomain-like 20 117 IPR009057 -
Phac8g02730 347 CDD SANT 25 70 IPR001005 -
Phac8g02730 347 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Phac8g02730 347 SMART sant 22 72 IPR001005 -
Phac8g02730 347 SMART sant 75 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02730 Phac-Chr8 36433954 36435346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02730 12 137 MYB Transcription Factor Family AT2G26960 64.122 1.61e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g02730 Myb_DNA-binding 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02730 K09422 - ccaj:109791291 298.13