Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02684 ATGGCTTTCACACTAGACAGGTGTGAAGATAGCATGGTGTTCACCATGGAGTCTCAGAAGTCAGTGCCTGCTCCCTTCCTGACAAAAACATACCAACTTGTTGATGACCCTTGCACAGACCACATTGTGTCTTGGGGTGATGATGAAACCACATTTGTTGTGAGGAGGCCCCCAGAGTTTGCTAGAGATCTTCTTCCCAACTATTTCAAGCACAACAACTTTTCAAGCTTTGTTAGGCAGCTAAATACTTATGGTTTCAAGAAGGTAGCTGCTGATAGGTGGGAGTTTGCAAATGAATACTTCAGAAAAGGATCTAAGCACCTTCTATGTGAAATCCACAGGAGGAAAACCCCTCACCTCTATCAACAACATTACCATATGCATGACCAACCATCACAGCTTCTTCAGCCAGATGAGAATCTGTGTTGGATTGATACTCCTCCACTACCATCTCCACCAGGCAATGATATCTTAGCAGCTCTTTCTGAGGACAACCAAAGACTGAGGAGAAAGAACTTCATGCTCTTATCAGAACTCACTCACATGAAGAATCTATACAATGACATCATATACTTCATCCAAAACCATATAAGTCCTGCTTCCTATGAACAAAGAAGCAGCAGTGCTATTCTGAAGCTGGTAGAATTGGAATCATCACCTCAAGCTCCAAATTTTATCAGACCAGCTAAGAGCCATATCATGGAGAAGTCTTTGGTAAGTTCTAGTGATGAGCCTAATAGTTCTGTGAAGCTCTTTGGGGTTCCTCTTTGTGGCAAAAAGAGATTGCACCCAGGTAACCTTCATCAACAAGAATAG 816 0.4252 MAFTLDRCEDSMVFTMESQKSVPAPFLTKTYQLVDDPCTDHIVSWGDDETTFVVRRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVAADRWEFANEYFRKGSKHLLCEIHRRKTPHLYQQHYHMHDQPSQLLQPDENLCWIDTPPLPSPPGNDILAALSEDNQRLRRKNFMLLSELTHMKNLYNDIIYFIQNHISPASYEQRSSSAILKLVELESSPQAPNFIRPAKSHIMEKSLVSSSDEPNSSVKLFGVPLCGKKRLHPGNLHQQE* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02684 271 Gene3D - 18 117 IPR036388 -
Phac8g02684 271 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac8g02684 271 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac8g02684 271 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac8g02684 271 FunFam Heat stress transcription factor B-4 18 116 - -
Phac8g02684 271 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Phac8g02684 271 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 233 IPR027725 -
Phac8g02684 271 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac8g02684 271 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac8g02684 271 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02684 Phac-Chr8 36029274 36031027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02684 20 263 HSF AT1G46264 49.660 1.38e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac8g02684 HSF_DNA-bind 4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02684 K09419 - gmx:100776060 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02684 8 36029274 36031027 Phac8g02684 8 36029274 36031027 ECH