Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02663 ATGTGGCCCGGCACCAATAGGTCTATCAATTACCCCGAAATGGGAATGTTCGTGGTGGCGCCAGCCTCATCGTTCCACCACCATCACCACCACCAGCAACCGCCGCCACACGACCCTGTCATGGCGGATTCCCTCAACCCCGCCACTGCACTCGGTGTCGGCGTCATCCCCCTGCTCGCCACCACGCCGTGTCTGGAACCCGACAACTTCCTAGGAAATAGGACTCGCGGTGGGGGAATTCAGTTTTGGCAAGATCAAGCGCCCCATCAGAGCCATTACATGAAGAAGCAGCAGCAACAGGGGCTTCTAGACCAAAGCAACACGAGTTCTGGAAATTTGGTTCAAAACAGTGGTGGTCTAACTGCTTCGGGTACTAGTAGTGGGGGAACAACGTGCCAAGATTGCGGAAACCAGGCCAAGAAAGATTGTACCAATAGAAGGTGTAGGACTTGTTGCAAAAGTCGAGGTTTCGATTGCCCTACCCATGTTAAGAGCACATGGGTTCCAGCGGCACGCCGGAGAGAGCGCCAGCTCATGACCACGGCTACTGTGGCGGTTGCTGGTTCCAGTGGCTCCACCTCCGGGACTAAAAAACCTAGACTCATTGCTTCACAAACCACTACAACATCTCACACTTCCACTTCTAACACCACCCCTCCTAGAAGCTTTGACACTAGCTCTAGCCATCAAGATGCGGGTTTCAAGGAGTCTTTACCTGGACAAGTACGTGCACCAGCGGTTTTCAAGTGTGTTAGAGTGACGGCGGTGGAGGATGGAGAAGATGAGTATGCGTATCAGGCTGTGGTAAAGATTGGTGGTCACGTGTTCAAAGGGTTTCTCTATGATCAAGGGGTGGAGAATAGGGATGTGTATCCAAACCTATCTGAGTTGCATTTGGGTGGTGGAAGTGGGAGTGGAGGCAGCGGTGGGGTGGGGAGAAATGGGGTTTCTTCTTCTGCAATGATGGATCCTTCTGATGTTTATGCAGCTTCGGGTGGAGGGTTACTTGGGGGTTCTTCTGCTTATGGTAATCCAATGAATTGA 1044 0.5239 MWPGTNRSINYPEMGMFVVAPASSFHHHHHHQQPPPHDPVMADSLNPATALGVGVIPLLATTPCLEPDNFLGNRTRGGGIQFWQDQAPHQSHYMKKQQQQGLLDQSNTSSGNLVQNSGGLTASGTSSGGTTCQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMTTATVAVAGSSGSTSGTKKPRLIASQTTTTSHTSTSNTTPPRSFDTSSSHQDAGFKESLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVENRDVYPNLSELHLGGGSGSGGSGGVGRNGVSSSAMMDPSDVYAASGGGLLGGSSAYGNPMN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02663 347 MobiDBLite consensus disorder prediction 87 140 - -
Phac8g02663 347 NCBIfam LRP1 C-terminal domain 238 285 IPR006511 -
Phac8g02663 347 MobiDBLite consensus disorder prediction 87 139 - -
Phac8g02663 347 NCBIfam putative zinc finger domain, LRP1 type 131 173 IPR006510 -
Phac8g02663 347 MobiDBLite consensus disorder prediction 184 238 - -
Phac8g02663 347 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 24 331 IPR007818 GO:0003700|GO:0006355
Phac8g02663 347 MobiDBLite consensus disorder prediction 184 234 - -
Phac8g02663 347 Pfam Domain of unknown function (DUF702) 129 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02663 Phac-Chr8 35830984 35834559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02663 13 327 C2H2 Transcription Factor Family AT5G12330 52.553 1.45e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Phac8g02663 DUF702 5.1e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02663 - - vun:114194574 581.637