Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02616 ATGCATGCGGATGCTGAAACAGATGAAGTATATGCACAAATCACTCTGCAACCTCTAAGTCCACAAGAGCAAAAGGAGGTGTATCTTATGCCTGCTGAATTGGGCTCTCCAAACAAGCAACCAACCAACTACTTCTGCAAAACATTAACTGCAAGTGATACCAGCACTCATGGAGGATTTTCTGTTCCTCGAAGAGCAGCTGAAAAAGTCTTCCCTCCTCTTGATTACTCACAGCAGCCTCCTGCTCAAGAACTAATTGCCAGAGATCTTCATGATAATGAATGGAAGTTTAGACACATATTTCGAGGTCAGCCCAAAAGGCATCTTCTCACTACTGGTTGGAGTGTCTTTGTCAGTGCCAAGAGGCTTGTTGCCGGTGATTCAGTCCTTTTCATCTGGAATGATAAAAATCAATTACTTTTGGGCATAAGGCGGGCAAATCGTCCACAGACTATAATGCCATCATCAGTTCTGTCAAGTGATAGCATGCACATTGGTCTTCTTGCTGCTGCAGCTCATGCAGCTGCTACAAACAGTCGCTTTACTATATTCTATAATCCTAGGGCAAGCCCATCTGAATTTGTCATTCCTTTGGCCAAGTATGTTAAAGCAGTGTATCACACACGAGTTTCTGTTGGCATGCGATTTAGGATGCTGTTTGAGACAGAAGAATCAAGTGTTCGTCGATACATGGGTACCATAACTGGTATTAGTGATTTAGATCCGGTCCGCTGGCCAAATTCACACTGGCGTTCTGTGAAGGTTGGCTGGGATGAGTCCACTGCAGGGGAGAGGCAGCCAAGAGTTTCCTTGTGGGAGATTGAACCTTTGACAACATTCCCAATGTATCCATCTCCATTCCCCTTAAGGCTGAGGCGTCCTTGGCCAACGGGCCTACCTTCTTTGTATGGTCTTAAGGATGGAGACATGGGAATTGGTTCTCCATTCATGTGGCTCCAAGGTGGACTTGGGGATCAAGGAATGCAATCTTTAAACTTCCAGGGGCTTGGTGTTACACCGTGGATGCAACCTAAACTTGACTCTTCTATACCAGGTCTCCAACCAGAGTTATACCAAGCAATGACTTCTGCTGCATTCCAGGAAATGAGGACAATGGATCCTTCAAAATCTTCCCAATCTCTGTTGCAGTTTCAGCAGACTTCAAATGTTCCCAGTGCTCATACCTCTGAGGTACATAGGCAAGTATTACCACAGTCTCAGCCTCAAAGCACCCTTCTACAAAATTTTCAAGAAAACCAAGTGCCTTCTCAGTCACAACTTCTGCAACAGCAGTTGCATCGTTACCACCCATATAGTGATCAGCGGCAACAGCAGCAGCAACTTAAAAATTTGCCTGTTCAGCAGCAGTTACCAAACGTCATCTCTCCTTTGTCTAATTTTGCATCAGGTACCCAGTCTCAATCTCCTCCCATGCAAGCTCTTGCTACGCATTGCCAGCAGCAGAGTTTTCCTGAACCTATCAGGAATCATATTTCTGGTTCTGATGTTTCCCCTATCCAGAGTCTACTAGGTTCGTTCTCCCAGGATGGAACATCCCAGTTACTTAACTTGAATGGATCCAATTCCATTATATCTTCTGCATCCATCCTACCCAAGCAAATGACAGTTGAATCTCAGCTTCCCTCTGCTGCTCCTCAATGTGTGTTGCCTCAGGTGGAGAACTTGGGAACATCACAATCAAATGTGTCTGAACTTGCTGCTTTGCCTCCATTTCCTGGAAGAGAACATTCTGCATACCATGGTGCTGCTGATCCTCAGAGCAATCTGTTATTTGGGATTAACATTGATCCCTCTTCTCTTATGCTGCAAAATGGCATGTCAAACCTGAGAAATATGGGCAATGTGAATGATTCATTATCATTGCCATTTTCTGCTTCAAATTGTGGTGGTGCTACAGGCACTGATTTCCCCTTAAGTTCAAACATGACAACTTCGAGTTGTGTGGATGAATCAGGCTTCTTGCAGTCTTCTGAAAATGTAGACCAAGCAAACACACCAACTGGAACCTTTGTTAAGGTTCACAAGTCAGGGTCCTTTGGCAGGTCACTGGACATTTCTAAGTTCAGCAGCTATGATGAGCTGCGTAGTGAGCTTGCTCGCATGTTTGGCCTTGAAGGCCAACTAGAGGACCCTAAGACTCAGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGATGTTCTTCTTCTTGGTGATGATCCTTGGCAGGAGTTTGTGAACAATGTGTGGTACATAAAAATACTATCTCCACTGGAAGTGCAGCAAATGGGCAAAGGTGTTAGTCCTTCTACTTCTGCCCCAGGTCACAAACTTTCTACCTCTGGGAACTCTTGTGATAATTATGTGAATCAACAAGAGTTGAGAAGTTCCAGAAATGGCATGGCATCAATGGGGTCTTTTCACTACTAG 2436 0.4479 MHADAETDEVYAQITLQPLSPQEQKEVYLMPAELGSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLRRPWPTGLPSLYGLKDGDMGIGSPFMWLQGGLGDQGMQSLNFQGLGVTPWMQPKLDSSIPGLQPELYQAMTSAAFQEMRTMDPSKSSQSLLQFQQTSNVPSAHTSEVHRQVLPQSQPQSTLLQNFQENQVPSQSQLLQQQLHRYHPYSDQRQQQQQLKNLPVQQQLPNVISPLSNFASGTQSQSPPMQALATHCQQQSFPEPIRNHISGSDVSPIQSLLGSFSQDGTSQLLNLNGSNSIISSASILPKQMTVESQLPSAAPQCVLPQVENLGTSQSNVSELAALPPFPGREHSAYHGAADPQSNLLFGINIDPSSLMLQNGMSNLRNMGNVNDSLSLPFSASNCGGATGTDFPLSSNMTTSSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPKTQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKGVSPSTSAPGHKLSTSGNSCDNYVNQQELRSSRNGMASMGSFHY* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02616 811 ProSiteProfiles B3 DNA-binding domain profile. 45 147 IPR003340 GO:0003677
Phac8g02616 811 MobiDBLite consensus disorder prediction 766 790 - -
Phac8g02616 811 FunFam Auxin response factor 670 766 - -
Phac8g02616 811 MobiDBLite consensus disorder prediction 463 482 - -
Phac8g02616 811 CDD B3_DNA 44 145 IPR003340 GO:0003677
Phac8g02616 811 ProSiteProfiles PB1 domain profile. 675 761 IPR000270 GO:0005515
Phac8g02616 811 Pfam Auxin response factor 171 254 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac8g02616 811 MobiDBLite consensus disorder prediction 370 402 - -
Phac8g02616 811 FunFam Auxin response factor 43 147 - -
Phac8g02616 811 Gene3D - 43 146 IPR015300 -
Phac8g02616 811 FunFam Auxin response factor 209 281 - -
Phac8g02616 811 SUPERFAMILY CAD & PB1 domains 668 751 - -
Phac8g02616 811 Gene3D - 671 766 - -
Phac8g02616 811 Pfam AUX/IAA family 664 759 IPR033389 -
Phac8g02616 811 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 767 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac8g02616 811 Gene3D - 209 281 - -
Phac8g02616 811 Pfam B3 DNA binding domain 45 146 IPR003340 GO:0003677
Phac8g02616 811 SMART B3_2 45 147 IPR003340 GO:0003677
Phac8g02616 811 SUPERFAMILY DNA-binding pseudobarrel domain 31 174 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02616 Phac-Chr8 35301874 35308759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02616 14 766 B3 DNA Binding Superfamily AT5G37020 54.928 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac8g02616 AUX_IAA 9.2e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02616 - - gmx:100810798 1503.8