Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02615 ATGAAGCTTTCTTCTTCTGGATTTAATCAACCGGGGGAGGAAGAAGGGGAGAAAAAATGTTTGAATTCTGAGCTTTGGCATGCATGTGCTGGTCCTCTGGTTTCTCTGCCTCCTGTTGGAAGTCGTGTAGTCTACTTTCCCCAAGGTCACAGTGAGCAGGTTGCTGCTTCAACCAACAGGGAAGTAGATGCACATATTCCTAATTACCCTAACTTGCCACCACAACTTATCTGTCAGCTTCACAATGTAACAATGCATGCGGATGCTGAAACAGATGAAGTATATGCACAAATCACTCTGCAACCTCTAAGTCCACAAGAGCAAAAGGAGGTGTATCTTATGCCTGCTGAATTGGGCTCTCCAAACAAGCAACCAACCAACTACTTCTGCAAAACATTAACTGCAAGTGATACCAGCACTCATGGAGGATTTTCTGTTCCTCGAAGAGCAGCTGAAAAAGTCTTCCCTCCTCTTGATTACTCACAGCAGCCTCCTGCTCAAGAACTAATTGCCAGAGATCTTCATGATAATGAATGGAAGTTTAGACACATATTTCGAGGTCAGCCCAAAAGGCATCTTCTCACTACTGGTTGGAGTGTCTTTGTCAGTGCCAAGAGGCTTGTTGCCGGTGATTCAGTCCTTTTCATCTGGAATGATAAAAATCAATTACTTTTGGGCATAAGGCGGGCAAATCGTCCACAGACTATAATGCCATCATCAGTTCTGTCAAGTGATAGCATGCACATTGGTCTTCTTGCTGCTGCAGCTCATGCAGCTGCTACAAACAGTCGCTTTACTATATTCTATAATCCTAGGGCAAGCCCATCTGAATTTGTCATTCCTTTGGCCAAGTATGTTAAAGCAGTGTATCACACACGAGTTTCTGTTGGCATGCGATTTAGGATGCTGTTTGAGACAGAAGAATCAAGTGTTCGTCGATACATGGGTACCATAACTGGTATTAGTGATTTAGATCCGGTCCGCTGGCCAAATTCACACTGGCGTTCTGTGAAGGTTGGCTGGGATGAGTCCACTGCAGGGGAGAGGCAGCCAAGAGTTTCCTTGTGGGAGATTGAACCTTTGACAACATTCCCAATGTATCCATCTCCATTCCCCTTAAGGCTGAGGCGTCCTTGGCCAACGGGCCTACCTTCTTTGTATGGTCTTAAGGATGGAGACATGGGAATTGGTTCTCCATTCATGTGGCTCCAAGGTGGACTTGGGGATCAAGGAATGCAATCTTTAAACTTCCAGGGGCTTGGTGTTACACCGTGGATGCAACCTAAACTTGACTCTTCTATACCAGGTCTCCAACCAGAGTTATACCAAGCAATGACTTCTGCTGCATTCCAGGAAATGAGGACAATGGATCCTTCAAAATCTTCCCAATCTCTGTTGCAGTTTCAGCAGACTTCAAATGTTCCCAGTGCTCATACCTCTGAGGTACATAGGCAAGTATTACCACAGTCTCAGCCTCAAAGCACCCTTCTACAAAATTTTCAAGAAAACCAAGTGCCTTCTCAGTCACAACTTCTGCAACAGCAGTTGCATCGTTACCACCCATATAGTGATCAGCGGCAACAGCAGCAGCAACTTAAAAATTTGCCTGTTCAGCAGCAGTTACCAAACGTCATCTCTCCTTTGTCTAATTTTGCATCAGGTACCCAGTCTCAATCTCCTCCCATGCAAGCTCTTGCTACGCATTGCCAGCAGCAGAGTTTTCCTGAACCTATCAGGAATCATATTTCTGGTTCTGATGTTTCCCCTATCCAGAGTCTACTAGGTTCGTTCTCCCAGGATGGAACATCCCAGTTACTTAACTTGAATGGATCCAATTCCATTATATCTTCTGCATCCATCCTACCCAAGCAAATGACAGTTGAATCTCAGCTTCCCTCTGCTGCTCCTCAATGTGTGTTGCCTCAGGTGGAGAACTTGGGAACATCACAATCAAATGTGTCTGAACTTGCTGCTTTGCCTCCATTTCCTGGAAGAGAACATTCTGCATACCATGGTGCTGCTGATCCTCAGAGCAATCTGTTATTTGGGATTAACATTGATCCCTCTTCTCTTATGCTGCAAAATGGCATGTCAAACCTGAGAAATATGGGCAATGTGAATGATTCATTATCATTGCCATTTTCTGCTTCAAATTGTGGTGGTGCTACAGGCACTGATTTCCCCTTAAGTTCAAACATGACAACTTCGAGTTGTGTGGATGAATCAGGCTTCTTGCAGTCTTCTGAAAATGTAGACCAAGCAAACACACCAACTGGAACCTTTGTTAAGGTAATAGCTAATATATTTTTGTTTAAAGATGGTATGCCTACATTTATATATTTTATGTGCAGCCACTTAATATAA 2364 0.4404 MKLSSSGFNQPGEEEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQLHNVTMHADAETDEVYAQITLQPLSPQEQKEVYLMPAELGSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLRRPWPTGLPSLYGLKDGDMGIGSPFMWLQGGLGDQGMQSLNFQGLGVTPWMQPKLDSSIPGLQPELYQAMTSAAFQEMRTMDPSKSSQSLLQFQQTSNVPSAHTSEVHRQVLPQSQPQSTLLQNFQENQVPSQSQLLQQQLHRYHPYSDQRQQQQQLKNLPVQQQLPNVISPLSNFASGTQSQSPPMQALATHCQQQSFPEPIRNHISGSDVSPIQSLLGSFSQDGTSQLLNLNGSNSIISSASILPKQMTVESQLPSAAPQCVLPQVENLGTSQSNVSELAALPPFPGREHSAYHGAADPQSNLLFGINIDPSSLMLQNGMSNLRNMGNVNDSLSLPFSASNCGGATGTDFPLSSNMTTSSCVDESGFLQSSENVDQANTPTGTFVKVIANIFLFKDGMPTFIYFMCSHLI* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02615 787 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Phac8g02615 787 SMART B3_2 129 231 IPR003340 GO:0003677
Phac8g02615 787 Gene3D - 127 230 IPR015300 -
Phac8g02615 787 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 764 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac8g02615 787 MobiDBLite consensus disorder prediction 454 486 - -
Phac8g02615 787 SUPERFAMILY DNA-binding pseudobarrel domain 115 258 IPR015300 -
Phac8g02615 787 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Phac8g02615 787 Pfam Auxin response factor 255 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac8g02615 787 CDD B3_DNA 128 229 IPR003340 GO:0003677
Phac8g02615 787 FunFam Auxin response factor 127 231 - -
Phac8g02615 787 Gene3D - 293 365 - -
Phac8g02615 787 FunFam Auxin response factor 293 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02615 Phac-Chr8 35301874 35310318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02615 1 471 B3 DNA Binding Superfamily AT1G30330 85.474 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac8g02615 B3 3.6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02615 - - gmx:100809105 1418.68