Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02587 ATGAAAAAGGTGAAACACAGAAAAATGAAAAACTGTGAGAGAAGTGTGAGGCAGTACAACAAATCTGAACTTCCACGCCTTCGTTGGACACCTGAACTCCATCAACACTTTGTTGAAGCTATTCAAAGTATAGGTGGAAAACACAAGGCAACTCCAAAGAGAATTCTGCAGCAGATGCGTGTGAGAGGACTGAGGATCGCTCACATCAAAAGCCATCTTCAGATGTACAGAAACATGAAAGACTATGCCAAGAATTCTCCAGATCAGTTGGTGGAAGGAAATGCAAACGATTTCAAACTATGCTCCATTTCTCCAACCCAAAGGATAATTCTGAAGGGGGAACTTCATCTCTTAGACAACAAAAAAGAGCTTTTACGAAGCAGTGAAGAAACTGATTATGATCTAAACCAGGAAGGGCAGTCAAGAGCATGGTTGGTGAGAGATGATGAGTCAAATGAAGAAGAAAATGTTCCTAATCTATTATTCTCCTTTAGCACACCTCTAATTTCCATGATGCAAAGTGATGAGAATAGCAAAGACATGATGCAATTTCCCTCATCAACTGCAGCCGCTGCTAATCATTCTATTACCTTTGGAAACAGTTATATTAACTTAGACCTAACAATCTGA 630 0.3968 MKKVKHRKMKNCERSVRQYNKSELPRLRWTPELHQHFVEAIQSIGGKHKATPKRILQQMRVRGLRIAHIKSHLQMYRNMKDYAKNSPDQLVEGNANDFKLCSISPTQRIILKGELHLLDNKKELLRSSEETDYDLNQEGQSRAWLVRDDESNEEENVPNLLFSFSTPLISMMQSDENSKDMMQFPSSTAAAANHSITFGNSYINLDLTI* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02587 209 SUPERFAMILY Homeodomain-like 25 79 IPR009057 -
Phac8g02587 209 Gene3D - 24 81 - -
Phac8g02587 209 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 13 141 IPR046955 GO:0003700
Phac8g02587 209 NCBIfam myb-like DNA-binding domain, SHAQKYF class 25 79 IPR006447 GO:0003677
Phac8g02587 209 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Phac8g02587 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
Phac8g02587 209 FunFam Two-component response regulator 20 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02587 Phac-Chr8 35171235 35176147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02587 16 80 G2-like Transcription Factor Family AT2G42660 61.538 3.86e-24 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac8g02587 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02587 - - pvu:PHAVU_008G196200g 362.844