Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02584 ATGGACAACTCAAATGATTCATCATCATCCTTGACTTTTGTATCATCTCAACTTTCACATGGTTCTAGTAATCACAACGTGTCTTCCTCTACCAGCAATGAGCATGGGGCAAATATTGAAATTTTGACTCTGAATAAGCTCAGTGGAAGCCTTGAGAAGTTACTGATTGATGCTGAGTATGACTATAGTGATGCTGAGATTGTCGTTGAAGACATATCTGTGGGTGTTCATCGCTGTATATTGGCCTCGCGTAGTCCTTTTTTTCATGAACTTTTTAAGAAAGGAACGGATGGATCAGGGAAGGAAGGAAAACCAAGGTATCTCATGTCAGAATTGGTGCCATATGGCGCGGTTGGATATGAAGCTTTCCAAGTTTTCTTGTACTATTTGTACACTGGAAGGCTAAAAGATTCACCAACAGAAGTGACAACATGTGTTGGTGAAACATGTATCCATGATGCATGTCGCCCTGCTATCGATTATGCGTTGGAGCTGATGTATGCTTCTGCCGCTTTTCTGATGAAAGAGCTGGTTTTACTTTTTCAGCGGCAACTGCTGAACTTTGTTGAGAAGGCTCTTGTGGAAGATGTGATTCCTATTCTTATGGCTGCTTTCAACTGCCAACTAGAGCAGCTTCTCTCTCGGTGCATTCACAAAGTGGCAAGCTCTGACTTAGACAACATATCTTTGGAAAAAGAGCTCCCTCATGAAGTTGTGACTGAAATCAAATCGTGCCGTCTCTCATCTCAGCCAGAATCCACAGCTGATGCAATGGAAGTGGAGCCTTTGAGTGAAAAGAGTATCATGAGAATCCATAAAGCATTGGACTCTGATGATGTTGAGCTACTGAAGCTTCTTCTAAATGAGTCAAGGGTCACCCTAGATGATGCATATGCCCTGCACTATGCCTGTGCCTATAGTGATTCTAAGGTTATTCAAGAACTTCTTGGTCTAGGTATGGCTGATATTCTTCGTAGAAATTCTCGAGGATACACGGTTCTTCATGTGGCTGCAAGGCGAAAGGATCCATCCATTTTGGTAGCACTGCTGAATAAAGGGGCATGTGCAACAGATACCACTCCAGATGGTCAAACGGCTCTTTCAATTTGTCAGAGGTTGACAAGACGCAAGGATTATCATGAGAAAACAGTGCATTGTAAGGAATCTAACAAGGACAGGCTCTGTGTTGATGTCCTGGAGAGGGAGATGAGAAGAAGTTCTATGACTGTGAGTATGTCTGTTTCATCCCAGTTAACAGCTGATGATTTGCACATGAGACTGGATTACCTTGAAGATAGAGTTACATTTGCTCGGTTGTTGTATCCTGCTGAGGCTAGGGTAGCCATTGAGAATGCTGAGGCAGATTCGTCATCACTGTACACAAACGTATCAGCTTTGGAGGGCGCAAATGCAAATCTAAAAGTAGATCTAAATGAATCTCCCTCTGCCCGAACCAGAAAACTTCAGTTAAGATTGCATGCCCTTATGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCCATTGTTCTGAAGTGCTTGATAAGTTTCTGGAAGATGATATGCCAGATGTGTTCTTCCTAGAAAAGGGCAGTGAAGAAGAGCAGAGAATGAAGAAAGCACGGTTCATGGAACTTAAAGATGATGTGCAGAAAGCATTTCACAAAGATATGGCTGAAAATAACCATACAGCTTTTTCATCTTCAGTGTCCTCCTCCTCATCTTCTACTCGGAGGGAAAGTCTTAACCACAGAGTGAGGAAAAAATGA 1767 0.4256 MDNSNDSSSSLTFVSSQLSHGSSNHNVSSSTSNEHGANIEILTLNKLSGSLEKLLIDAEYDYSDAEIVVEDISVGVHRCILASRSPFFHELFKKGTDGSGKEGKPRYLMSELVPYGAVGYEAFQVFLYYLYTGRLKDSPTEVTTCVGETCIHDACRPAIDYALELMYASAAFLMKELVLLFQRQLLNFVEKALVEDVIPILMAAFNCQLEQLLSRCIHKVASSDLDNISLEKELPHEVVTEIKSCRLSSQPESTADAMEVEPLSEKSIMRIHKALDSDDVELLKLLLNESRVTLDDAYALHYACAYSDSKVIQELLGLGMADILRRNSRGYTVLHVAARRKDPSILVALLNKGACATDTTPDGQTALSICQRLTRRKDYHEKTVHCKESNKDRLCVDVLEREMRRSSMTVSMSVSSQLTADDLHMRLDYLEDRVTFARLLYPAEARVAIENAEADSSSLYTNVSALEGANANLKVDLNESPSARTRKLQLRLHALMKTVENGRRFFPHCSEVLDKFLEDDMPDVFFLEKGSEEEQRMKKARFMELKDDVQKAFHKDMAENNHTAFSSSVSSSSSSTRRESLNHRVRKK* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02584 588 Pfam NPR1/NIM1 like defence protein C terminal 371 572 IPR021094 -
Phac8g02584 588 SMART ANK_2a 329 358 IPR002110 GO:0005515
Phac8g02584 588 SMART ANK_2a 266 294 IPR002110 GO:0005515
Phac8g02584 588 SMART ANK_2a 295 325 IPR002110 GO:0005515
Phac8g02584 588 Pfam BTB/POZ domain 60 140 IPR000210 GO:0005515
Phac8g02584 588 Pfam Domain of unknown function (DUF3420) 224 272 IPR024228 -
Phac8g02584 588 ProSiteProfiles BTB domain profile. 63 139 IPR000210 GO:0005515
Phac8g02584 588 Gene3D Potassium Channel Kv1.1; Chain A 31 221 IPR011333 -
Phac8g02584 588 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 236 393 - -
Phac8g02584 588 SMART BTB_4 63 189 IPR000210 GO:0005515
Phac8g02584 588 FunFam Regulatory protein NPR3 37 221 - -
Phac8g02584 588 ProSiteProfiles Ankyrin repeat profile. 329 354 IPR002110 GO:0005515
Phac8g02584 588 Gene3D - 263 403 IPR036770 -
Phac8g02584 588 Pfam Ankyrin repeats (many copies) 299 350 IPR002110 GO:0005515
Phac8g02584 588 PANTHER REGULATORY PROTEIN NPR3 22 582 IPR044292 GO:0009862|GO:2000022|GO:2000031
Phac8g02584 588 CDD BTB_POZ_NPR_plant 45 189 - -
Phac8g02584 588 MobiDBLite consensus disorder prediction 1 33 - -
Phac8g02584 588 MobiDBLite consensus disorder prediction 556 588 - -
Phac8g02584 588 SUPERFAMILY Ankyrin repeat 265 372 IPR036770 -
Phac8g02584 588 ProSiteProfiles Ankyrin repeat region circular profile. 329 354 - -
Phac8g02584 588 SUPERFAMILY POZ domain 60 187 IPR011333 -
Phac8g02584 588 MobiDBLite consensus disorder prediction 560 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02584 Phac-Chr8 35150197 35154930 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phac8g02584 NPR1_like_C 2.8e-81 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02584 K14508 - gmx:100814739 964.526